BTNL2, chr6:32361740-32374905 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3806157 chr6:32373801 BTNL2 All: C 103,235 14 G vs. T 0.408 (G) 0.317 (G) 0.92 (0.89-0.95) 0 (0-52) 1.75e-07
rs3806156 chr6:32373698 BTNL2 All: C 103,235 14 T vs. G 0.408 (T) 0.467 (T) 0.92 (0.89-0.95) 0 (0-55) 2.07e-07
rs3135344 chr6:32395036 HLA-DRA [-12583bp] All: C 103,235 14 C vs. T 0.4 (C) 0.033 (C) 1.10 (1.06-1.13) 0 (0-36) 2.56e-07
rs9268362 chr6:32333341 C6orf10 All: C 103,235 14 G vs. A 0.3 (G) 0.075 (G) 0.89 (0.86-0.93) 8 (0-44) 3.28e-07
rs3817973 chr6:32361111 BTNL2 [-629bp] All: C 103,235 14 C vs. T 0.492 (C) 0.333 (T) 1.09 (1.05-1.12) 51 (10-74) 3.55e-07
rs9268435 chr6:32346491 C6orf10 [+6807bp] All: C 103,235 14 A vs. G 0.483 (A) 0.167 (A) 0.92 (0.89-0.95) 37 (0-67) 3.59e-07
rs2076533 chr6:32363527 BTNL2 All: C 103,235 14 C vs. T 0.492 (C) 0.333 (T) 1.09 (1.05-1.12) 50 (8-73) 4.37e-07
rs9268473 chr6:32355683 BTNL2 [-6057bp] All: C 103,235 14 G vs. A 0.492 (G) 0.317 (G) 0.92 (0.89-0.95) 51 (10-73) 5.95e-07
rs2395175 chr6:32405026 HLA-DRA [-2593bp] C - 12 A vs. G 0.25 (A) 0.083 (A) <1 (-) 9 (-) <1.00e-06
rs2076529 chr6:32363955 BTNL2 All: C 103,235 14 T vs. C 0.492 (T) 0.333 (C) 1.08 (1.05-1.12) 52 (11-74) 8.67e-07
rs9268556 chr6:32386964 BTNL2 [+12059bp] All: C 103,235 14 C vs. T 0.392 (C) 0.45 (C) 0.92 (0.89-0.95) 0 (-) 1.09e-06
rs9268542 chr6:32384721 BTNL2 [+9816bp] All: C 103,235 14 G vs. A 0.392 (G) 0.458 (G) 0.92 (0.89-0.95) 0 (0-3) 1.10e-06
rs4335021 chr6:32386619 BTNL2 [+11714bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 0 (0-35) 1.19e-06
rs9268544 chr6:32385453 BTNL2 [+10548bp] All: C 103,235 14 A vs. G 0.392 (A) 0.458 (A) 0.92 (0.89-0.95) 0 (0-3) 1.21e-06
rs4959098 chr6:32383256 BTNL2 [+8351bp] All: C 103,235 14 A vs. C 0.483 (A) 0.175 (A) 1.08 (1.05-1.12) 0 (0-41) 1.32e-06
rs9268528 chr6:32383108 BTNL2 [+8203bp] All: C 103,235 14 G vs. A 0.392 (G) 0.45 (G) 0.92 (0.89-0.95) 0 (0-14) 1.52e-06
rs9268545 chr6:32385750 BTNL2 [+10845bp] All: C 103,235 14 C vs. T 0.392 (C) 0.458 (C) 0.92 (0.89-0.95) 0 (0-9) 1.55e-06
rs2395166 chr6:32388275 BTNL2 [+13370bp] All: C 103,235 14 C vs. T 0.458 (C) 0.183 (C) 1.08 (1.05-1.12) 0 (0-38) 1.62e-06
rs7774047 chr6:32398563 HLA-DRA [-9056bp] All: C 103,235 14 A vs. C 0.408 (A) 0.475 (C) 0.92 (0.89-0.95) 0 (0-25) 1.63e-06
rs9268607 chr6:32400538 HLA-DRA [-7081bp] All: C 103,235 14 G vs. A 0.4 (G) 0.475 (A) 0.92 (0.89-0.95) 0 (0-31) 1.95e-06
rs2076525 chr6:32370616 BTNL2 C - 12 T vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs2076522 chr6:32371179 BTNL2 C - 12 C vs. G 0.342 (C) 0.133 (C) <1 (-) 0 (-) <1.00e-04
rs2076524 chr6:32370684 BTNL2 C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs2294880 chr6:32367722 BTNL2 C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs3817962 chr6:32368314 BTNL2 C - 12 A vs. C 0.342 (A) 0.133 (A) <1 (-) 0 (-) <1.00e-04
rs9268482 chr6:32367777 BTNL2 C - 12 A vs. T 0.342 (T) 0.133 (T) >1 (-) 0 (-) <1.00e-04
rs3793126 chr6:32371619 BTNL2 C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs3763307 chr6:32374622 BTNL2 C - 12 A vs. T 0.342 (T) 0.133 (T) >1 (-) 0 (-) <1.00e-04
rs9268417 chr6:32343616 C6orf10 [+3932bp] C - 12 A vs. G 0.333 (G) 0.125 (G) >1 (-) 0 (-) <1.00e-04
rs9268404 chr6:32341719 C6orf10 [+2035bp] C - 12 T vs. C 0.325 (T) 0.125 (T) <1 (-) 0 (-) <1.00e-04
rs9268450 chr6:32348690 C6orf10 [+9006bp] C - 12 A vs. G 0.342 (A) 0.158 (A) <1 (-) 0 (-) <1.00e-04
rs9268481 chr6:32364356 BTNL2 C - 12 A vs. G 0.342 (G) 0.142 (G) >1 (-) 0 (-) <1.00e-04
rs2076520 chr6:32371269 BTNL2 C - 12 T vs. C 0.342 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04
rs2395157 chr6:32348145 C6orf10 [+8461bp] C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs9268453 chr6:32349571 C6orf10 [+9887bp] C - 12 T vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs9268474 chr6:32357165 BTNL2 [-4575bp] C - 12 T vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs2395155 chr6:32347897 C6orf10 [+8213bp] C - 12 T vs. C 0.342 (T) 0.117 (T) <1 (-) 0 (-) <1.00e-04
rs2395156 chr6:32348098 C6orf10 [+8414bp] C - 12 A vs. C 0.342 (A) 0.075 (A) <1 (-) 0 (-) <1.00e-04
rs9268454 chr6:32349711 C6orf10 [+10027bp] C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs2157332 chr6:32392661 HLA-DRA [-14958bp] All: C 103,235 14 T vs. C 0.4 (T) 0.458 (T) 0.93 (0.90-0.96) 0 (0-26) 3.10e-06
rs9268447 chr6:32347831 C6orf10 [+8147bp] C - 12 T vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs960736 chr6:32402225 HLA-DRA [-5394bp] All: C 103,235 14 T vs. C - - 1.08 (1.05-1.12) 0 (0-28) 3.20e-06
rs8180664 chr6:32347490 C6orf10 [+7806bp] C - 12 T vs. C 0.342 (T) 0.142 (T) <1 (-) 0 (-) <1.00e-04
rs1980494 chr6:32347016 C6orf10 [+7332bp] C - 12 A vs. G 0.317 (G) - >1 (-) 0 (-) <1.00e-04
rs8180659 chr6:32347280 C6orf10 [+7596bp] C - 12 T vs. C 0.342 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04
rs9268439 chr6:32346701 C6orf10 [+7017bp] C - 12 A vs. G 0.333 (A) 0.133 (A) <1 (-) 0 (-) <1.00e-04
rs9268436 chr6:32346637 C6orf10 [+6953bp] C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs9268431 chr6:32345514 C6orf10 [+5830bp] C - 12 T vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs9268432 chr6:32345667 C6orf10 [+5983bp] C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs9268428 chr6:32344973 C6orf10 [+5289bp] C - 12 T vs. G 0.342 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04

Association studies for this region [+]