BTNL2, chr6:32361740-32374905 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2894252 chr6:32345443 C6orf10 [+5759bp] C - 12 T vs. G 0.342 (T) 0.125 (T) <1 (-) 0 (-) <1.00e-04
rs9268415 chr6:32343267 C6orf10 [+3583bp] C - 12 C vs. G 0.342 (C) 0.133 (C) <1 (-) 0 (-) <1.00e-04
rs9268480 chr6:32363844 BTNL2 C - 12 T vs. C 0.342 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04
rs9268425 chr6:32344376 C6orf10 [+4692bp] C - 12 T vs. C 0.342 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04
rs9268406 chr6:32342129 C6orf10 [+2445bp] C - 12 T vs. C 0.342 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04
rs9268446 chr6:32347749 C6orf10 [+8065bp] C - 12 A vs. G 0.35 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs1987305 chr6:32401996 HLA-DRA [-5623bp] All: C 103,235 14 G vs. T - - 1.08 (1.05-1.12) 0 (0-19) 3.67e-06
rs9268399 chr6:32340236 C6orf10 [+552bp] C - 12 A vs. G 0.408 (A) 0.258 (A) <1 (-) 0 (-) <1.00e-04
rs9268426 chr6:32344731 C6orf10 [+5047bp] C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs9268416 chr6:32343384 C6orf10 [+3700bp] C - 12 A vs. G 0.342 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs9268405 chr6:32342087 C6orf10 [+2403bp] C - 12 T vs. C 0.35 (T) 0.133 (T) <1 (-) 0 (-) <1.00e-04
rs9268412 chr6:32343018 C6orf10 [+3334bp] C - 12 A vs. T 0.342 (A) - <1 (-) 0 (-) <1.00e-04
rs9268407 chr6:32342166 C6orf10 [+2482bp] C - 12 T vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs3817966 chr6:32367847 BTNL2 C - 12 T vs. C 0.342 (C) 0.283 (C) >1 (-) 0 (-) <1.00e-04
rs9268409 chr6:32342639 C6orf10 [+2955bp] C - 12 A vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs9268427 chr6:32344808 C6orf10 [+5124bp] C - 12 T vs. C - - <1 (-) 0 (-) <1.00e-04
rs9268401 chr6:32341318 C6orf10 [+1634bp] C - 12 A vs. G 0.342 (G) 0.15 (G) >1 (-) 0 (-) <1.00e-04
rs1980495 chr6:32346794 C6orf10 [+7110bp] C - 12 A vs. C 0.342 (C) 0.117 (C) >1 (-) 0 (-) <1.00e-04
rs9268403 chr6:32341473 C6orf10 [+1789bp] C - 12 T vs. C 0.342 (C) 0.133 (C) >1 (-) 0 (-) <1.00e-04
rs9268684 chr6:32415457 HLA-DRA [+2634bp] All: C 103,235 14 A vs. G 0.442 (A) 0.458 (G) 0.93 (0.90-0.96) 0 (-) 4.32e-06
rs9268400 chr6:32340654 C6orf10 [+970bp] C - 12 A vs. G 0.342 (A) 0.042 (A) <1 (-) 0 (-) <1.00e-04
rs9268589 chr6:32398202 HLA-DRA [-9417bp] All: C 103,235 14 A vs. G 0.408 (A) 0.475 (G) 0.93 (0.90-0.96) 0 (0-30) 4.35e-06
rs9268583 chr6:32397266 HLA-DRA [-10353bp] All: C 103,235 14 G vs. T 0.4 (G) 0.45 (G) 0.93 (0.90-0.96) 0 (0-26) 4.73e-06
rs9268634 chr6:32406530 HLA-DRA [-1089bp] All: C 103,235 14 A vs. G 0.4 (A) 0.483 (G) 0.93 (0.90-0.96) 0 (0-30) 4.77e-06
rs9268605 chr6:32399833 HLA-DRA [-7786bp] All: C 103,235 14 A vs. G 0.4 (A) 0.475 (G) 0.93 (0.90-0.96) 0 (0-30) 4.79e-06
rs9268606 chr6:32400070 HLA-DRA [-7549bp] All: C 103,235 14 A vs. G 0.4 (A) 0.475 (G) 0.93 (0.90-0.96) 0 (0-30) 4.80e-06
rs2894256 chr6:32415585 HLA-DRA [+2762bp] All: C 103,235 14 A vs. C 0.458 (A) 0.458 (C) 0.93 (0.90-0.96) 0 (0-1) 4.81e-06
rs9268608 chr6:32400865 HLA-DRA [-6754bp] All: C 103,235 14 T vs. C 0.4 (T) 0.475 (C) 0.93 (0.90-0.96) 0 (0-30) 4.84e-06
rs4612206 chr6:32404093 HLA-DRA [-3526bp] All: C 97,715 13 T vs. C 0.4 (T) 0.475 (C) 0.93 (0.90-0.96) 0 (0-36) 4.86e-06
rs4348358 chr6:32399092 HLA-DRA [-8527bp] All: C 103,235 14 A vs. G 0.4 (A) 0.475 (G) 0.93 (0.90-0.96) 0 (0-30) 4.87e-06
rs9268613 chr6:32402692 HLA-DRA [-4927bp] All: C 103,235 14 T vs. C 0.4 (T) 0.483 (C) 0.93 (0.90-0.96) 0 (0-30) 4.89e-06
rs9268657 chr6:32409656 HLA-DRA All: C 103,235 14 A vs. G 0.4 (A) 0.458 (G) 0.93 (0.90-0.96) 0 (0-26) 4.90e-06
rs13201101 chr6:32343604 C6orf10 [+3920bp] All: C 103,235 14 T vs. C 0.042 (T) 0.075 (T) 1.18 (1.10-1.27) 35 (0-66) 4.94e-06
rs7773756 chr6:32402464 HLA-DRA [-5155bp] All: C 103,235 14 C vs. T 0.4 (C) 0.458 (T) 0.93 (0.90-0.96) 0 (0-30) 4.95e-06
rs7753264 chr6:32402440 HLA-DRA [-5179bp] All: C 103,235 14 G vs. A 0.4 (G) 0.475 (A) 0.93 (0.90-0.96) 0 (0-30) 4.99e-06
rs9268609 chr6:32401261 HLA-DRA [-6358bp] All: C 103,235 14 A vs. G 0.4 (A) 0.475 (G) 0.93 (0.90-0.96) 0 (0-30) 5.14e-06
rs9268610 chr6:32401263 HLA-DRA [-6356bp] All: C 103,235 14 C vs. T 0.4 (C) 0.475 (T) 0.93 (0.90-0.96) 0 (0-30) 5.14e-06
rs9268579 chr6:32396450 HLA-DRA [-11169bp] All: C 103,235 14 A vs. G 0.4 (A) 0.45 (A) 0.93 (0.90-0.96) 0 (0-26) 5.55e-06
rs9268582 chr6:32396964 HLA-DRA [-10655bp] All: C 103,235 14 T vs. C 0.4 (T) 0.45 (T) 0.93 (0.90-0.96) 0 (0-26) 5.66e-06
rs9268744 chr6:32417278 HLA-DRA [+4455bp] All: C 103,235 14 G vs. A 0.375 (G) 0.425 (G) 1.08 (1.05-1.12) 0 (-) 5.66e-06
rs9268585 chr6:32397403 HLA-DRA [-10216bp] All: C 103,235 14 G vs. T 0.4 (G) 0.45 (G) 0.93 (0.90-0.96) 0 (0-26) 5.69e-06
rs9268578 chr6:32396057 HLA-DRA [-11562bp] All: C 103,235 14 G vs. A 0.4 (G) 0.45 (G) 0.93 (0.90-0.96) 0 (0-27) 5.92e-06
rs9268494 chr6:32375352 BTNL2 [+447bp] C - 12 A vs. C 0.342 (C) 0.492 (C) >1 (-) 0 (-) <1.00e-04
rs9268677 chr6:32414668 HLA-DRA [+1845bp] All: C 103,235 14 G vs. A - - 1.08 (1.04-1.12) 0 (-) 6.15e-06
rs9268673 chr6:32414433 HLA-DRA [+1610bp] All: C 103,235 14 T vs. C 0.45 (T) 0.467 (C) 0.93 (0.90-0.96) 0 (0-5) 6.38e-06
rs28895023 chr6:32347338 C6orf10 [+7654bp] All: C 103,235 14 A vs. G 0.042 (A) 0.125 (A) 1.18 (1.10-1.27) 35 (0-66) 6.68e-06
rs9268681 chr6:32415386 HLA-DRA [+2563bp] All: C 103,235 14 A vs. G 0.458 (A) 0.458 (G) 0.93 (0.90-0.96) 0 (0-1) 6.79e-06
rs9268682 chr6:32415422 HLA-DRA [+2599bp] All: C 103,235 14 T vs. G 0.458 (T) 0.458 (G) 0.93 (0.90-0.96) 0 (-) 7.05e-06
rs9268652 chr6:32409056 HLA-DRA All: C 103,235 14 G vs. A - - 0.92 (0.89-0.95) 40 (0-68) 8.74e-06
rs9268693 chr6:32416826 HLA-DRA [+4003bp] All: C 103,235 14 C vs. T - - 1.08 (1.04-1.12) 0 (0-4) 8.81e-06

Association studies for this region [+]