BTNL2, chr6:32361740-32374905 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117660964 chr6:32385948 BTNL2 [+11043bp] C - 3 A vs. G - 0.05 (G) >1 (-) 0 (-) >0.05
rs3117103 chr6:32349557 C6orf10 [+9873bp] C - 12 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs28732211 chr6:32398616 HLA-DRA [-9003bp] C - 12 A vs. T 0.05 (A) - >1 (-) 0 (-) >0.05
rs3135363 chr6:32389648 BTNL2 [+14743bp] C - 11 A vs. G 0.183 (G) 0.275 (G) >1 (-) 0 (-) >0.05
rs28732210 chr6:32398497 HLA-DRA [-9122bp] C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs28732212 chr6:32402531 HLA-DRA [-5088bp] C - 12 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs118010815 chr6:32373774 BTNL2 C - 11 A vs. G - 0.15 (A) <1 (-) 13 (-) >0.05
rs28732213 chr6:32403119 HLA-DRA [-4500bp] C - 12 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs117130854 chr6:32358432 BTNL2 [-3308bp] C - 10 A vs. G - 0.15 (A) <1 (-) 2 (-) >0.05
rs3129950 chr6:32358201 BTNL2 [-3539bp] C - 12 C vs. G 0.1 (C) - <1 (-) 0 (-) >0.05
rs117590326 chr6:32365093 BTNL2 C - 9 A vs. T - 0.15 (A) <1 (-) 0 (-) >0.05
rs9296027 chr6:32393062 HLA-DRA [-14557bp] C - 12 C vs. G 0.083 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs115303880 chr6:32358459 BTNL2 [-3281bp] C - 10 T vs. G 0.167 (T) 0.192 (T) <1 (-) 2 (-) >0.05
rs117510940 chr6:32365491 BTNL2 C - 9 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs73404904 chr6:32395507 HLA-DRA [-12112bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs117882890 chr6:32363558 BTNL2 C - 9 A vs. T - 0.15 (T) <1 (-) 0 (-) >0.05
rs73400843 chr6:32371500 BTNL2 C - 11 A vs. G 0.025 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs117802793 chr6:32365503 BTNL2 C - 9 T vs. C - 0.142 (C) <1 (-) 0 (-) >0.05
rs3129966 chr6:32381280 BTNL2 [+6375bp] C - 12 C vs. G 0.092 (C) - <1 (-) 4 (-) >0.05
rs117217900 chr6:32365532 BTNL2 C - 9 C vs. G - 0.15 (C) >1 (-) 0 (-) >0.05
rs117099966 chr6:32365791 BTNL2 C - 9 A vs. G - 0.15 (G) <1 (-) 0 (-) >0.05
rs117623763 chr6:32368016 BTNL2 C - 11 A vs. G - 0.15 (A) >1 (-) 9 (-) >0.05
rs116963671 chr6:32367971 BTNL2 C - 11 A vs. G - 0.142 (A) >1 (-) 9 (-) >0.05
rs73407174 chr6:32406224 HLA-DRA [-1395bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs117709429 chr6:32365785 BTNL2 C - 9 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs113273903 chr6:32406316 HLA-DRA [-1303bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs28732214 chr6:32406122 HLA-DRA [-1497bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs969892 chr6:32316312 C6orf10 C - 12 T vs. C 0.217 (C) 0.125 (C) <1 (-) 3 (-) >0.05
rs3129956 chr6:32368462 BTNL2 C - 12 A vs. G - - <1 (-) 2 (-) >0.05
rs115347370 chr6:32339761 C6orf10 [+77bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs115911147 chr6:32398170 HLA-DRA [-9449bp] C - 8 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs118023064 chr6:32365752 BTNL2 C - 9 A vs. G - 0.15 (G) <1 (-) 0 (-) >0.05
rs6907757 chr6:32325358 C6orf10 C - 12 T vs. C 0.125 (T) 0.333 (T) >1 (-) 43 (-) >0.05
rs118039543 chr6:32365359 BTNL2 C - 9 T vs. C - 0.15 (C) >1 (-) 0 (-) >0.05
rs117870843 chr6:32364273 BTNL2 C - 9 A vs. G - 0.15 (A) >1 (-) 0 (-) >0.05
rs117054202 chr6:32365748 BTNL2 C - 9 T vs. C - 0.15 (C) <1 (-) 0 (-) >0.05
rs117349956 chr6:32359756 BTNL2 [-1984bp] C - 10 A vs. G - 0.125 (A) <1 (-) 10 (-) >0.05
rs9501622 chr6:32394251 HLA-DRA [-13368bp] C - 12 A vs. T 0.083 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs9501400 chr6:32394184 HLA-DRA [-13435bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs117886263 chr6:32358666 BTNL2 [-3074bp] C - 10 A vs. G - 0.15 (G) >1 (-) 3 (-) >0.05
rs117869812 chr6:32359724 BTNL2 [-2016bp] C - 10 A vs. G - 0.125 (A) <1 (-) 10 (-) >0.05
rs73407164 chr6:32404795 HLA-DRA [-2824bp] C - 12 A vs. T - - <1 (-) 0 (-) >0.05
rs118117353 chr6:32365280 BTNL2 C - 9 T vs. G - 0.142 (G) >1 (-) 0 (-) >0.05
rs60365717 chr6:32401626 HLA-DRA [-5993bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs58480447 chr6:32401296 HLA-DRA [-6323bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs118094977 chr6:32359185 BTNL2 [-2555bp] C - 10 T vs. C - 0.15 (C) >1 (-) 15 (-) >0.05
rs118113452 chr6:32365720 BTNL2 C - 9 A vs. G - 0.142 (A) >1 (-) 0 (-) >0.05
rs117231421 chr6:32359586 BTNL2 [-2154bp] C - 10 T vs. C - 0.142 (C) >1 (-) 10 (-) >0.05
rs2073048 chr6:32335433 C6orf10 C - 12 A vs. G 0.125 (A) 0.3 (A) >1 (-) 44 (-) >0.05
rs118169940 chr6:32359571 BTNL2 [-2169bp] C - 10 T vs. G - 0.142 (G) >1 (-) 10 (-) >0.05

Association studies for this region [+]