BTNL2, chr6:32361740-32374905 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13199443 chr6:32419312 HLA-DRA [+6489bp] All: C 103,235 14 G vs. A 0.167 (G) - 1.09 (1.04-1.14) 63 (34-79) 4.37e-04
rs28895107 chr6:32419782 HLA-DRA [+6959bp] All: C 103,235 14 C vs. T 0.192 (C) 0.033 (C) 1.09 (1.04-1.14) 63 (34-79) 4.43e-04
rs28895141 chr6:32421689 HLA-DRA [+8866bp] All: C 103,235 14 A vs. C 0.158 (A) 0.033 (A) 1.10 (1.04-1.16) 64 (36-80) 4.51e-04
rs13204032 chr6:32420469 HLA-DRA [+7646bp] All: C 103,235 14 T vs. C 0.15 (T) - 1.10 (1.04-1.16) 63 (35-79) 4.52e-04
rs28895143 chr6:32421739 HLA-DRA [+8916bp] All: C 103,235 14 G vs. A 0.192 (G) 0.033 (G) 1.10 (1.04-1.16) 64 (36-80) 4.52e-04
rs9268370 chr6:32334258 C6orf10 All: C 103,235 14 T vs. G 0.4 (T) 0.392 (T) 0.94 (0.91-0.98) 0 (0-54) 4.52e-04
rs9268675 chr6:32414542 HLA-DRA [+1719bp] All: C 103,235 14 C vs. T - - 0.93 (0.90-0.97) 60 (28-78) 4.54e-04
rs28895116 chr6:32420164 HLA-DRA [+7341bp] All: C 103,235 14 G vs. T - - 0.91 (0.86-0.96) 63 (35-79) 4.66e-04
rs6934200 chr6:32331069 C6orf10 All: C 103,235 14 C vs. T 0.383 (C) 0.392 (C) 0.94 (0.91-0.97) 0 (0-55) 4.66e-04
rs3117104 chr6:32348309 C6orf10 [+8625bp] C - 12 A vs. T 0.325 (T) 0.258 (T) <1 (-) 67 (-) <0.05
rs28895108 chr6:32419860 HLA-DRA [+7037bp] All: C 103,235 14 G vs. T 0.192 (G) - 1.09 (1.04-1.14) 63 (34-79) 4.75e-04
rs28895106 chr6:32419576 HLA-DRA [+6753bp] All: C 103,235 14 A vs. G 0.167 (A) 0.033 (A) 1.09 (1.04-1.14) 63 (34-79) 4.80e-04
rs28895109 chr6:32419880 HLA-DRA [+7057bp] All: C 103,235 14 C vs. T 0.183 (C) - 1.09 (1.04-1.14) 63 (34-79) 4.80e-04
rs28895103 chr6:32419464 HLA-DRA [+6641bp] All: C 103,235 14 A vs. G 0.183 (A) - 1.09 (1.04-1.14) 63 (34-79) 4.82e-04
rs28895104 chr6:32419527 HLA-DRA [+6704bp] All: C 103,235 14 C vs. T 0.183 (C) 0.025 (C) 1.09 (1.04-1.14) 63 (34-79) 4.83e-04
rs13209059 chr6:32416078 HLA-DRA [+3255bp] All: C 103,235 14 G vs. A 0.192 (G) 0.05 (G) 1.09 (1.04-1.14) 60 (28-78) 4.86e-04
rs28895105 chr6:32419553 HLA-DRA [+6730bp] All: C 103,235 14 C vs. T 0.183 (C) 0.025 (C) 1.09 (1.04-1.14) 63 (34-79) 4.87e-04
rs28895101 chr6:32419439 HLA-DRA [+6616bp] All: C 103,235 14 T vs. C 0.175 (T) - 1.09 (1.04-1.14) 63 (34-79) 4.99e-04
rs28895070 chr6:32417674 HLA-DRA [+4851bp] All: C 103,235 14 T vs. C - - 0.92 (0.87-0.96) 62 (33-79) 5.00e-04
rs28895030 chr6:32416161 HLA-DRA [+3338bp] All: C 103,235 14 A vs. G 0.192 (A) - 1.09 (1.04-1.14) 60 (29-78) 5.19e-04
rs13208132 chr6:32421152 HLA-DRA [+8329bp] All: C 103,235 14 A vs. G 0.192 (A) - 1.09 (1.04-1.15) 63 (35-79) 5.22e-04
rs28895114 chr6:32420071 HLA-DRA [+7248bp] All: C 103,235 14 C vs. T 0.192 (C) - 1.09 (1.04-1.15) 63 (35-79) 5.35e-04
rs13199014 chr6:32419012 HLA-DRA [+6189bp] All: C 103,235 14 C vs. A 0.167 (C) - 1.09 (1.04-1.14) 64 (35-79) 5.41e-04
rs13199346 chr6:32418986 HLA-DRA [+6163bp] All: C 103,235 14 T vs. G 0.167 (T) - 1.09 (1.04-1.14) 63 (35-79) 5.48e-04
rs2073046 chr6:32336074 C6orf10 All: C 100,402 13 T vs. C 0.383 (T) 0.392 (T) 0.94 (0.91-0.98) 4 (0-59) 5.50e-04
rs28895031 chr6:32416175 HLA-DRA [+3352bp] All: C 103,235 14 A vs. G 0.192 (A) 0.033 (A) 1.09 (1.04-1.14) 60 (28-78) 5.56e-04
rs9348883 chr6:32358549 BTNL2 [-3191bp] All: C 103,235 14 A vs. T 0.042 (A) 0.108 (A) 1.12 (1.05-1.20) 42 (0-69) 5.56e-04
rs28895067 chr6:32417545 HLA-DRA [+4722bp] All: C 103,235 14 T vs. C - - 0.92 (0.87-0.96) 63 (33-79) 5.58e-04
rs28895117 chr6:32420324 HLA-DRA [+7501bp] All: C 103,235 14 G vs. T - - 0.92 (0.87-0.96) 63 (35-79) 5.61e-04
rs28895102 chr6:32419447 HLA-DRA [+6624bp] All: C 103,235 14 A vs. C 0.175 (A) - 1.09 (1.04-1.14) 63 (34-79) 5.65e-04
rs7746327 chr6:32342691 C6orf10 [+3007bp] All: C 103,235 14 C vs. A 0.45 (C) 0.408 (A) 1.06 (1.03-1.09) 41 (0-69) 5.73e-04
rs3135385 chr6:32416366 HLA-DRA [+3543bp] All: C 103,235 14 A vs. G 0.233 (A) 0.283 (A) 1.07 (1.03-1.12) 47 (1-71) 5.81e-04
rs13215138 chr6:32418923 HLA-DRA [+6100bp] All: C 103,235 14 G vs. T 0.142 (G) - 1.09 (1.04-1.14) 63 (35-79) 5.88e-04
rs9469108 chr6:32380892 BTNL2 [+5987bp] All: C 103,235 14 T vs. C 0.217 (T) 0.183 (T) 1.08 (1.03-1.12) 50 (9-73) 5.89e-04
rs3129948 chr6:32354644 BTNL2 [-7096bp] All: C 103,235 14 C vs. A 0.308 (C) 0.25 (C) 1.06 (1.03-1.10) 65 (39-80) 5.99e-04
rs143211074 chr6:32372791 BTNL2 All: C 74,530 6 C vs. T - - 1.50 (1.19-1.89) 0 (0-73) 6.28e-04
rs9268402 chr6:32341353 C6orf10 [+1669bp] All: C 103,235 14 G vs. A 0.45 (G) 0.408 (A) 1.06 (1.02-1.09) 42 (0-69) 6.43e-04
rs2395153 chr6:32345595 C6orf10 [+5911bp] C - 12 C vs. G 0.483 (G) 0.167 (G) >1 (-) 45 (-) <0.05
rs3117105 chr6:32343714 C6orf10 [+4030bp] C - 12 T vs. C 0.317 (T) 0.25 (T) >1 (-) 68 (-) <0.05
rs28895090 chr6:32418546 HLA-DRA [+5723bp] All: C 103,235 14 G vs. A 0.192 (G) 0.033 (G) 1.09 (1.04-1.14) 63 (33-79) 6.71e-04
rs7197 chr6:32412580 HLA-DRA All: C 103,235 14 T vs. C 0.225 (T) 0.058 (T) 1.08 (1.03-1.12) 45 (0-71) 6.81e-04
rs3117108 chr6:32342822 C6orf10 [+3138bp] C - 12 C vs. G 0.308 (C) 0.267 (C) >1 (-) 68 (-) <0.05
rs13207824 chr6:32421129 HLA-DRA [+8306bp] All: C 103,235 14 G vs. A 0.192 (G) 0.033 (G) 1.09 (1.04-1.15) 64 (35-80) 6.85e-04
rs13193730 chr6:32421110 HLA-DRA [+8287bp] All: C 103,235 14 C vs. T 0.192 (C) 0.033 (C) 1.09 (1.04-1.15) 64 (36-80) 6.96e-04
rs4959027 chr6:32383050 BTNL2 [+8145bp] All: C 103,235 14 A vs. G 0.275 (A) 0.008 (A) 1.07 (1.03-1.11) 41 (0-69) 6.98e-04
rs2395182 chr6:32413317 HLA-DRA [+494bp] All: C 103,235 14 G vs. T 0.225 (G) 0.167 (G) 1.07 (1.03-1.11) 48 (4-72) 7.01e-04
rs141589422 chr6:32362318 BTNL2 All: C 74,530 6 C vs. T - - 1.47 (1.18-1.83) 0 (0-74) 7.10e-04
rs9391858 chr6:32341398 C6orf10 [+1714bp] All: C 103,235 14 G vs. A 0.175 (G) 0.108 (G) 1.08 (1.03-1.13) 50 (8-73) 7.12e-04
rs28895133 chr6:32421391 HLA-DRA [+8568bp] All: C 103,235 14 A vs. C - - 0.92 (0.87-0.96) 64 (36-80) 7.16e-04
rs28895134 chr6:32421423 HLA-DRA [+8600bp] All: C 103,235 14 T vs. C 0.183 (T) 0.033 (T) 1.09 (1.04-1.15) 64 (36-80) 7.16e-04

Association studies for this region [+]