C1orf85, chr1:156259880-156265463 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138107820 chr1:156299132 CCT3 All: C 96,250 12 C vs. T - - 0.59 (0.45-0.78) 0 (0-32) 1.55e-04
Meta_image?name=rs138107820

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2025577 chr1:156314104 CCT3 C - 13 T vs. C 0.467 (C) 0.483 (C) <1 (-) 22 (-) >0.05
rs1804999 chr1:156219450 SMG5 C - 13 A vs. G 0.467 (G) 0.5 (G) <1 (-) 24 (-) >0.05
rs7542993 chr1:156224726 SMG5 C - 13 A vs. C - - <1 (-) 24 (-) >0.05
rs2764403 chr1:156303074 CCT3 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs2764402 chr1:156303527 CCT3 C - 13 T vs. C 0.333 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs2075165 chr1:156215899 PAQR6 C - 13 A vs. G 0.458 (A) 0.492 (G) >1 (-) 25 (-) >0.05
rs12755542 chr1:156281406 CCT3 C - 13 A vs. G 0.333 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs933489 chr1:156235120 SMG5 C - 13 T vs. C 0.475 (C) 0.492 (T) <1 (-) 22 (-) >0.05
rs2250265 chr1:156291365 CCT3 C - 13 T vs. C 0.333 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs7542798 chr1:156224304 SMG5 C - 13 T vs. C 0.467 (C) 0.492 (T) <1 (-) 30 (-) >0.05
rs2758614 chr1:156236674 SMG5 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11264472 chr1:156292366 CCT3 C - 13 A vs. G 0.442 (G) - <1 (-) 18 (-) >0.05
rs2249790 chr1:156287360 CCT3 C - 13 T vs. C 0.333 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs2764404 chr1:156286423 CCT3 C - 13 T vs. C 0.333 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs2248273 chr1:156247907 SMG5 C - 13 T vs. C 0.325 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs759329 chr1:156230936 SMG5 C - 13 A vs. G 0.467 (G) 0.492 (A) <1 (-) 29 (-) >0.05
rs3001791 chr1:156251425 SMG5 C - 13 T vs. G 0.333 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs2842862 chr1:156275471 CCT3 [-3288bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs2842880 chr1:156232358 SMG5 C - 13 T vs. C 0.333 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs10908492 chr1:156224795 SMG5 C - 13 T vs. C 0.467 (T) 0.492 (T) >1 (-) 31 (-) >0.05
rs2296374 chr1:156287403 CCT3 C - 13 T vs. C 0.467 (C) 0.467 (C) <1 (-) 20 (-) >0.05
rs2985709 chr1:156299578 CCT3 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs2985710 chr1:156269869 VHLL [+441bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs7522860 chr1:156275281 CCT3 [-3478bp] C - 13 A vs. G 0.467 (A) 0.467 (A) >1 (-) 22 (-) >0.05
rs12072638 chr1:156267480 VHLL [-935bp] C - 13 T vs. G 0.433 (G) 0.408 (G) <1 (-) 21 (-) >0.05
rs139399073 chr1:156224686 SMG5 C - 7 A vs. G - - <1 (-) 21 (-) >0.05
rs12748659 chr1:156299998 CCT3 C - 8 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs35161831 chr1:156300731 CCT3 C - 8 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs12128955 chr1:156243821 SMG5 C - 13 T vs. C 0.475 (T) 0.417 (T) >1 (-) 20 (-) >0.05
rs9943105 chr1:156245245 SMG5 C - 13 T vs. C 0.475 (C) 0.458 (C) <1 (-) 20 (-) >0.05
rs7542045 chr1:156246473 SMG5 C - 13 C vs. G 0.467 (C) 0.475 (C) >1 (-) 20 (-) >0.05
rs6701440 chr1:156249505 SMG5 C - 13 A vs. G 0.467 (G) 0.475 (G) <1 (-) 23 (-) >0.05
rs2842863 chr1:156286396 CCT3 C - 13 A vs. G 0.242 (G) - >1 (-) 0 (-) >0.05
rs78320178 chr1:156269113 VHLL C - 9 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs949464 chr1:156272271 VHLL [+2843bp] C - 13 T vs. C 0.467 (T) 0.458 (T) >1 (-) 22 (-) >0.05
rs11264460 chr1:156210422 PMF1-BGLAP C - 13 A vs. G - - >1 (-) 28 (-) >0.05
rs147948306 chr1:156297116 CCT3 C - 11 C vs. G - - <1 (-) 26 (-) >0.05
rs150735235 chr1:156274227 CCT3 [-4532bp] C - 5 A vs. C - - >1 (-) 0 (-) >0.05
rs2256704 chr1:156232131 SMG5 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs34377219 chr1:156235800 SMG5 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs41265043 chr1:156314497 CCT3 C - 12 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs16837272 chr1:156240835 SMG5 C - 13 A vs. C 0.183 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs114297274 chr1:156308105 CCT3 C - 10 A vs. G 0.008 (A) - <1 (-) 38 (-) >0.05
rs77234346 chr1:156234008 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs145513321 chr1:156269168 VHLL C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs2230194 chr1:156280971 CCT3 C - 3 A vs. G - 0.208 (A) <1 (-) 0 (-) >0.05
rs74996533 chr1:156240338 SMG5 C - 12 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs11548200 chr1:156290656 CCT3 C - 13 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs7537271 chr1:156260552 TMEM79 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2277872 chr1:156246728 SMG5 C - 13 T vs. G 0.167 (G) 0.267 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]