C1orf85, chr1:156259880-156265463 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138107820 chr1:156299132 CCT3 All: C 96,250 12 C vs. T - - 0.59 (0.45-0.78) 0 (0-32) 1.55e-04
Meta_image?name=rs138107820

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115851838 chr1:156277781 CCT3 [-978bp] C - 12 A vs. G 0.025 (A) - >1 (-) 1 (-) >0.05
rs60418539 chr1:156271326 VHLL [+1898bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7523827 chr1:156268330 VHLL [-85bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs4661038 chr1:156258503 TMEM79 C - 13 A vs. T 0.167 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs3795728 chr1:156261491 TMEM79 C - 13 C vs. G 0.167 (C) 0.267 (C) <1 (-) 0 (-) >0.05
rs61814799 chr1:156295453 CCT3 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6696400 chr1:156276216 CCT3 [-2543bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4661037 chr1:156238479 SMG5 C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs140965733 chr1:156258532 TMEM79 C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs2287026 chr1:156230002 SMG5 C - 13 A vs. G 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs115667544 chr1:156251608 SMG5 C - 8 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs12090516 chr1:156210557 PMF1-BGLAP C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs12066033 chr1:156232198 SMG5 C - 13 T vs. C 0.167 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs2287024 chr1:156230206 SMG5 C - 13 A vs. C 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs2287025 chr1:156230141 SMG5 C - 13 A vs. T 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs2093487 chr1:156231725 SMG5 C - 13 A vs. C 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs7523099 chr1:156234638 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2365152 chr1:156231484 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6669805 chr1:156228108 SMG5 C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs6693732 chr1:156228544 SMG5 C - 13 A vs. G 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs61814770 chr1:156232737 SMG5 C - 13 A vs. T 0.167 (T) 0.3 (T) >1 (-) 0 (-) >0.05
rs6699349 chr1:156226950 SMG5 C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs7533548 chr1:156230605 SMG5 C - 13 C vs. G 0.158 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs12079226 chr1:156270061 VHLL [+633bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs759328 chr1:156231266 SMG5 C - 13 C vs. G 0.167 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs2010206 chr1:156274143 CCT3 [-4616bp] C - 13 A vs. G 0.142 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs7552992 chr1:156224656 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs35831149 chr1:156230272 SMG5 C - 10 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs114416960 chr1:156247665 SMG5 C - 6 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs142007952 chr1:156228647 SMG5 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs141883748 chr1:156246170 SMG5 C - 12 A vs. G - - >1 (-) 10 (-) >0.05
rs35478936 chr1:156305162 CCT3 C - 13 T vs. C 0.167 (T) 0.283 (T) <1 (-) 0 (-) >0.05
rs36038623 chr1:156217253 PAQR6 C - 12 C vs. G 0.1 (C) - >1 (-) 0 (-) >0.05
rs6672860 chr1:156293897 CCT3 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs71630621 chr1:156250166 SMG5 C - 5 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs115617321 chr1:156214733 PAQR6 C - 10 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs142661706 chr1:156253475 TMEM79 C - 13 T vs. C - - >1 (-) 18 (-) >0.05
rs62001925 chr1:156214601 PAQR6 C - 10 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs116822844 chr1:156300698 CCT3 C - 5 A vs. G 0.025 (A) - >1 (-) 40 (-) >0.05
rs41265035 chr1:156247967 SMG5 C - 13 C vs. G 0.025 (C) - >1 (-) 18 (-) >0.05
rs41265037 chr1:156305565 CCT3 C - 8 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs61814809 chr1:156313282 CCT3 C - 13 A vs. T 0.167 (T) 0.283 (T) >1 (-) 0 (-) >0.05
rs7543925 chr1:156300110 CCT3 C - 13 T vs. C 0.167 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs4661036 chr1:156233479 SMG5 C - 13 T vs. C 0.167 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs12401854 chr1:156217401 PAQR6 C - 13 T vs. C 0.108 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs75854315 chr1:156223056 SMG5 C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs7513351 chr1:156213921 PAQR6 C - 13 T vs. C 0.117 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs2540169 chr1:156218114 PAQR6 [+233bp] C - 13 A vs. G 0.192 (A) 0.267 (A) <1 (-) 24 (-) >0.05
rs3795730 chr1:156291026 CCT3 C - 9 T vs. C 0.05 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs148390696 chr1:156262607 TMEM79 C - 11 C vs. G - - >1 (-) 7 (-) >0.05

Association studies for this region [+]