CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10947137 chr6:31094971 PSORS1C1 C - 12 A vs. C 0.1 (C) 0.083 (C) <1 (-) 1 (-) >0.05
rs74375290 chr6:31097025 PSORS1C1 C - 11 T vs. C - 0.067 (C) <1 (-) 0 (-) >0.05
rs55803249 chr6:31093914 PSORS1C1 C - 12 A vs. G 0.025 (A) - <1 (-) 13 (-) >0.05
rs145071290 chr6:31113725 CCHCR1 C - 7 C vs. G - - <1 (-) 0 (-) >0.05
rs2517479 chr6:31074246 C6orf15 [-4754bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2535278 chr6:31074258 C6orf15 [-4742bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs150326631 chr6:31140758 POU5F1 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs2233945 chr6:31107361 PSORS1C1 C - 12 A vs. C 0.175 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs1063646 chr6:31107648 PSORS1C1 C - 12 T vs. C 0.175 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs7771083 chr6:31144684 POU5F1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs3132569 chr6:31101426 PSORS1C1 C - 12 A vs. G 0.158 (A) 0.367 (A) <1 (-) 25 (-) >0.05
rs3778630 chr6:31091328 PSORS1C1 C - 12 A vs. G 0.025 (A) 0.092 (A) <1 (-) 14 (-) >0.05
rs17197227 chr6:31140411 POU5F1 C - 12 T vs. C - 0.033 (T) <1 (-) 0 (-) >0.05
rs28744238 chr6:31173806 HCG27 [+2061bp] C - 12 T vs. C 0.2 (C) 0.042 (C) <1 (-) 41 (-) >0.05
rs57229995 chr6:31137735 POU5F1 C - 12 C vs. G - 0.192 (C) >1 (-) 18 (-) >0.05
rs62401301 chr6:31154329 POU5F1 [+5821bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs6913301 chr6:31151926 POU5F1 [+3418bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs1265051 chr6:31080704 C6orf15 [+368bp] C - 12 T vs. G 0.242 (G) 0.342 (G) <1 (-) 39 (-) >0.05
rs6917517 chr6:31082361 PSORS1C1 [-166bp] C - 12 T vs. C 0.133 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs9263636 chr6:31082716 PSORS1C1 C - 12 A vs. T 0.125 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs9263641 chr6:31083022 PSORS1C1 C - 12 T vs. C 0.125 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs1265047 chr6:31081464 PSORS1C1 [-1063bp] C - 12 A vs. G 0.45 (G) 0.35 (G) >1 (-) 0 (-) >0.05
rs76630444 chr6:31164664 HCG27 [-873bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs143669580 chr6:31074224 C6orf15 [-4776bp] C - 3 T vs. G - - <1 (-) 0 (-) >0.05
rs112580951 chr6:31175520 HCG27 [+3775bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs17191216 chr6:31176000 HCG27 [+4255bp] C - 12 C vs. G 0.142 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs2233946 chr6:31107338 PSORS1C1 C - 12 C vs. G 0.175 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs9263637 chr6:31082843 PSORS1C1 C - 12 T vs. C 0.108 (C) 0.142 (C) <1 (-) 0 (-) >0.05
rs7771067 chr6:31108306 PSORS1C1 [+437bp] C - 12 A vs. G - - <1 (-) 24 (-) >0.05
rs77626073 chr6:31172874 HCG27 [+1129bp] C - 10 T vs. C 0.025 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs6927322 chr6:31088981 PSORS1C1 C - 7 T vs. G - - <1 (-) 0 (-) >0.05
rs2233974 chr6:31080016 C6orf15 C - 12 C vs. G 0.175 (G) 0.017 (G) >1 (-) 12 (-) >0.05
rs78587959 chr6:31161387 HCG27 [-4150bp] C - 11 T vs. C - 0.05 (T) <1 (-) 0 (-) >0.05
rs75285297 chr6:31159455 HCG27 [-6082bp] C - 11 T vs. C 0.025 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs61444472 chr6:31102305 PSORS1C1 C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs137861710 chr6:31159139 HCG27 [-6398bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs3132556 chr6:31078809 C6orf15 [-191bp] C - 12 A vs. T 0.183 (T) 0.042 (T) >1 (-) 4 (-) >0.05
rs9263616 chr6:31072885 C6orf15 [-6115bp] C - 12 A vs. T 0.4 (T) - >1 (-) 8 (-) >0.05
rs13212902 chr6:31101904 PSORS1C1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs113771657 chr6:31094929 PSORS1C1 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs28744241 chr6:31175226 HCG27 [+3481bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs28732096 chr6:31076839 C6orf15 [-2161bp] C - 12 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs9263750 chr6:31114655 CCHCR1 C - 12 T vs. C 0.175 (C) 0.1 (C) >1 (-) 15 (-) >0.05
rs28360048 chr6:31114597 CCHCR1 C - 12 A vs. T - - <1 (-) 0 (-) >0.05
rs115549093 chr6:31166762 HCG27 C - 12 C vs. G - - >1 (-) 36 (-) >0.05
rs28360052 chr6:31145416 POU5F1 C - 12 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs116513928 chr6:31074393 C6orf15 [-4607bp] C - 12 C vs. G 0.025 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs2233962 chr6:31080981 C6orf15 [+645bp] C - 12 T vs. C 0.225 (C) 0.333 (C) >1 (-) 18 (-) >0.05
rs28732100 chr6:31104593 PSORS1C1 C - 12 T vs. C 0.05 (T) 0.008 (T) <1 (-) 0 (-) >0.05
rs117403002 chr6:31076494 C6orf15 [-2506bp] C - 12 T vs. C - 0.042 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]