CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9500878 chr6:31159291 HCG27 [-6246bp] C - 12 T vs. C - - <1 (-) 32 (-) >0.05
rs1265083 chr6:31111347 CCHCR1 C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs3909111 chr6:31096128 PSORS1C1 C - 12 C vs. G 0.058 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs72853119 chr6:31069083 C6orf15 [-9917bp] C - 3 T vs. G - - >1 (-) 0 (-) >0.05
rs17191090 chr6:31154593 POU5F1 [+6085bp] C - 12 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs17197381 chr6:31154081 POU5F1 [+5573bp] C - 12 T vs. G - 0.017 (T) >1 (-) 0 (-) >0.05
rs2233969 chr6:31080432 C6orf15 [+96bp] C - 12 A vs. G 0.208 (G) 0.342 (G) <1 (-) 18 (-) >0.05
rs1265158 chr6:31140741 POU5F1 C - 12 C vs. G 0.325 (G) 0.242 (G) <1 (-) 16 (-) >0.05
rs3871248 chr6:31145991 POU5F1 C - 12 T vs. C 0.308 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs9263859 chr6:31158124 HCG27 [-7413bp] C - 11 A vs. T 0.142 (A) - >1 (-) 0 (-) >0.05
rs9368657 chr6:31146477 POU5F1 C - 12 T vs. C 0.308 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs9368658 chr6:31146513 POU5F1 C - 12 A vs. G 0.308 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs17191019 chr6:31153913 POU5F1 [+5405bp] C - 12 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs17191033 chr6:31154009 POU5F1 [+5501bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs6909321 chr6:31093190 PSORS1C1 C - 12 A vs. G 0.067 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs1108746 chr6:31139504 POU5F1 C - 12 A vs. C 0.1 (A) 0.142 (A) >1 (-) 0 (-) >0.05
rs12201248 chr6:31069476 C6orf15 [-9524bp] C - 12 A vs. T 0.067 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs9263591 chr6:31071287 C6orf15 [-7713bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs9461656 chr6:31161255 HCG27 [-4282bp] C - 12 T vs. G 0.158 (T) 0.092 (T) >1 (-) 32 (-) >0.05
rs147666351 chr6:31157824 HCG27 [-7713bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs114713021 chr6:31156772 POU5F1 [+8264bp] C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs146176932 chr6:31156723 POU5F1 [+8215bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs146468817 chr6:31158190 HCG27 [-7347bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs150452508 chr6:31158401 HCG27 [-7136bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs139231871 chr6:31156290 POU5F1 [+7782bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs148332761 chr6:31153235 POU5F1 [+4727bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs140446199 chr6:31153022 POU5F1 [+4514bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs17197220 chr6:31139131 POU5F1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs74705176 chr6:31118903 CCHCR1 C - 11 T vs. C 0.033 (T) - >1 (-) 13 (-) >0.05
rs116116256 chr6:31155790 POU5F1 [+7282bp] C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs62400929 chr6:31159546 HCG27 [-5991bp] C - 7 A vs. G - - >1 (-) 15 (-) >0.05
rs9263560 chr6:31069342 C6orf15 [-9658bp] C - 12 A vs. G 0.217 (A) 0.4 (A) >1 (-) 19 (-) >0.05
rs9500881 chr6:31159833 HCG27 [-5704bp] C - 12 A vs. T - - <1 (-) 32 (-) >0.05
rs9501066 chr6:31145271 POU5F1 C - 12 A vs. G 0.308 (G) 0.475 (A) <1 (-) 0 (-) >0.05
rs9357110 chr6:31147725 POU5F1 C - 12 A vs. G 0.308 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs7744751 chr6:31150475 POU5F1 [+1967bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs7744752 chr6:31150479 POU5F1 [+1971bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs141825207 chr6:31151424 POU5F1 [+2916bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs9263745 chr6:31113326 CCHCR1 C - 12 A vs. G 0.175 (A) 0.033 (A) <1 (-) 3 (-) >0.05
rs4713433 chr6:31068026 C6orf15 [-10974bp] C - 12 A vs. C 0.208 (A) 0.358 (A) >1 (-) 14 (-) >0.05
rs9263577 chr6:31069904 C6orf15 [-9096bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs3823403 chr6:31081746 PSORS1C1 [-781bp] C - 12 T vs. C 0.2 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs151035561 chr6:31144454 POU5F1 C - 12 A vs. T - - >1 (-) 5 (-) >0.05
rs9501504 chr6:31144849 POU5F1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs149078038 chr6:31151362 POU5F1 [+2854bp] C - 12 T vs. C - - >1 (-) 1 (-) >0.05
rs3868542 chr6:31145839 POU5F1 C - 12 T vs. C 0.308 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs150257303 chr6:31093901 PSORS1C1 C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs3823402 chr6:31081743 PSORS1C1 [-784bp] C - 12 A vs. T 0.2 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs9263610 chr6:31072695 C6orf15 [-6305bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs17840029 chr6:31136752 POU5F1 C - 12 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05

Association studies for this region [+]