CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9263715 chr6:31095801 PSORS1C1 C - 12 A vs. G 0.125 (A) 0.358 (A) <1 (-) 0 (-) >0.05
rs76465289 chr6:31134833 TCF19 C - 12 T vs. C 0.008 (T) 0.075 (T) >1 (-) 21 (-) >0.05
rs9391813 chr6:31145073 POU5F1 C - 12 T vs. C - - >1 (-) 12 (-) >0.05
rs1793900 chr6:31164723 HCG27 [-814bp] C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs76364340 chr6:31133982 TCF19 C - 12 T vs. C - 0.067 (T) >1 (-) 21 (-) >0.05
rs74762922 chr6:31105011 PSORS1C1 C - 12 A vs. G - - >1 (-) 11 (-) >0.05
rs9263572 chr6:31069749 C6orf15 [-9251bp] C - 12 A vs. C - - <1 (-) 19 (-) >0.05
rs6906566 chr6:31097820 PSORS1C1 C - 12 T vs. C 0.108 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs9263843 chr6:31154830 POU5F1 [+6322bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs9263692 chr6:31093093 PSORS1C1 C - 12 A vs. G 0.058 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs7743435 chr6:31101202 PSORS1C1 C - 12 T vs. C 0.108 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs9263700 chr6:31093948 PSORS1C1 C - 12 T vs. C 0.058 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs9263822 chr6:31144917 POU5F1 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs3823418 chr6:31100942 PSORS1C1 C - 12 A vs. G 0.1 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs6911408 chr6:31095066 PSORS1C1 C - 12 T vs. C 0.125 (C) 0.35 (C) >1 (-) 0 (-) >0.05
rs28742577 chr6:31164409 HCG27 [-1128bp] C - 12 T vs. C 0.017 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs9501062 chr6:31131707 TCF19 C - 12 T vs. C 0.033 (C) 0.183 (C) <1 (-) 41 (-) >0.05
rs130074 chr6:31111174 CCHCR1 C - 12 A vs. C - 0.175 (A) >1 (-) 40 (-) >0.05
rs9501058 chr6:31111710 CCHCR1 C - 12 C vs. G - - <1 (-) 41 (-) >0.05
rs2285804 chr6:31107204 PSORS1C1 C - 12 C vs. G - 0.183 (C) >1 (-) 34 (-) >0.05
rs9263706 chr6:31095210 PSORS1C1 C - 12 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs149792111 chr6:31112135 CCHCR1 C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs9766032 chr6:31098410 PSORS1C1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs11967883 chr6:31112354 CCHCR1 C - 12 T vs. C 0.033 (T) 0.183 (T) >1 (-) 41 (-) >0.05
rs13196568 chr6:31098400 PSORS1C1 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs2072108 chr6:31107031 PSORS1C1 C - 12 T vs. C - 0.183 (C) <1 (-) 33 (-) >0.05
rs2073718 chr6:31110969 CCHCR1 C - 12 T vs. C 0.033 (T) 0.183 (T) >1 (-) 40 (-) >0.05
rs9263833 chr6:31152562 POU5F1 [+4054bp] C - 12 T vs. C - - >1 (-) 25 (-) >0.05
rs3778640 chr6:31094120 PSORS1C1 C - 12 C vs. G 0.067 (C) 0.233 (C) <1 (-) 0 (-) >0.05
rs3823419 chr6:31101001 PSORS1C1 C - 12 A vs. G 0.1 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs114913688 chr6:31109566 CCHCR1 [-650bp] C - 12 A vs. T 0.133 (A) - <1 (-) 26 (-) >0.05
rs142056411 chr6:31109739 CCHCR1 [-477bp] C - 7 T vs. C - - <1 (-) 31 (-) >0.05
rs9263825 chr6:31147515 POU5F1 C - 12 A vs. G - - <1 (-) 26 (-) >0.05
rs3909109 chr6:31096367 PSORS1C1 C - 12 A vs. G 0.117 (G) 0.317 (G) >1 (-) 34 (-) >0.05
rs9501509 chr6:31163632 HCG27 [-1905bp] C - 12 A vs. G 0.15 (A) 0.092 (A) >1 (-) 33 (-) >0.05
rs116653040 chr6:31109567 CCHCR1 [-649bp] C - 12 C vs. G 0.133 (G) - >1 (-) 26 (-) >0.05
rs12191595 chr6:31094129 PSORS1C1 C - 12 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs3778639 chr6:31093776 PSORS1C1 C - 12 A vs. G - 0.233 (G) >1 (-) 0 (-) >0.05
rs62398818 chr6:31109070 CCHCR1 [-1146bp] C - 12 A vs. G 0.033 (A) 0.117 (A) >1 (-) 37 (-) >0.05
rs9500876 chr6:31108648 PSORS1C1 [+779bp] C - 12 C vs. G 0.033 (G) 0.183 (G) <1 (-) 37 (-) >0.05
rs16898844 chr6:31109693 CCHCR1 [-523bp] C - 12 T vs. C 0.033 (T) 0.183 (T) >1 (-) 38 (-) >0.05
rs9263838 chr6:31153872 POU5F1 [+5364bp] C - 12 T vs. C 0.175 (T) 0.025 (T) <1 (-) 25 (-) >0.05
rs59044818 chr6:31119310 CCHCR1 C - 12 T vs. C - 0.183 (T) >1 (-) 43 (-) >0.05
rs6931464 chr6:31095007 PSORS1C1 C - 12 A vs. G 0.125 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs148022859 chr6:31161594 HCG27 [-3943bp] C - 3 C vs. G - - >1 (-) 72 (-) >0.05
rs4486065 chr6:31080733 C6orf15 [+397bp] C - 12 C vs. G 0.192 (G) 0.342 (G) >1 (-) 27 (-) >0.05
rs11757801 chr6:31100402 PSORS1C1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9404937 chr6:31144637 POU5F1 C - 12 A vs. G - - >1 (-) 24 (-) >0.05
rs6932435 chr6:31095285 PSORS1C1 C - 12 C vs. G 0.117 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs60483630 chr6:31119351 CCHCR1 C - 12 A vs. G 0.033 (A) 0.183 (A) >1 (-) 43 (-) >0.05

Association studies for this region [+]