CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6909939 chr6:31140518 POU5F1 C - 12 A vs. G 0.175 (A) 0.142 (A) <1 (-) 21 (-) >0.05
rs9295951 chr6:31077646 C6orf15 [-1354bp] C - 12 T vs. C 0.208 (T) 0.358 (T) >1 (-) 14 (-) >0.05
rs7760698 chr6:31150225 POU5F1 [+1717bp] C - 11 A vs. T 0.017 (A) 0.025 (A) >1 (-) 2 (-) >0.05
rs117404334 chr6:31068607 C6orf15 [-10393bp] C - 8 T vs. C - 0.142 (C) >1 (-) 0 (-) >0.05
rs9468873 chr6:31101880 PSORS1C1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs115510688 chr6:31085505 PSORS1C1 C - 10 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs9391816 chr6:31145123 POU5F1 C - 12 A vs. G 0.308 (G) 0.483 (A) <1 (-) 24 (-) >0.05
rs2233967 chr6:31080828 C6orf15 [+492bp] C - 12 C vs. G 0.2 (G) 0.3 (G) >1 (-) 27 (-) >0.05
rs6932221 chr6:31095420 PSORS1C1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs885949 chr6:31140220 POU5F1 C - 12 T vs. C 0.1 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs2233965 chr6:31080899 C6orf15 [+563bp] C - 12 T vs. G 0.2 (G) 0.3 (G) >1 (-) 28 (-) >0.05
rs6913074 chr6:31151751 POU5F1 [+3243bp] C - 12 T vs. C 0.175 (T) - <1 (-) 33 (-) >0.05
rs6910473 chr6:31140808 POU5F1 C - 12 A vs. G 0.175 (A) 0.042 (A) <1 (-) 23 (-) >0.05
rs6932240 chr6:31095461 PSORS1C1 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs116371977 chr6:31140068 POU5F1 C - 12 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs9263832 chr6:31152541 POU5F1 [+4033bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs6916474 chr6:31095466 PSORS1C1 C - 12 A vs. T 0.117 (A) - <1 (-) 0 (-) >0.05
rs9263701 chr6:31094154 PSORS1C1 C - 11 T vs. G 0.125 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs118024262 chr6:31119188 CCHCR1 C - 5 T vs. C - 0.117 (T) >1 (-) 0 (-) >0.05
rs116493652 chr6:31131796 TCF19 C - 5 A vs. G - - <1 (-) 20 (-) >0.05
rs140918932 chr6:31172903 HCG27 [+1158bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs887467 chr6:31141664 POU5F1 C - 12 C vs. G 0.358 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs1042127 chr6:31084170 PSORS1C1 C - 11 A vs. C 0.158 (C) 0.15 (C) <1 (-) 0 (-) >0.05
rs4713436 chr6:31084639 PSORS1C1 C - 11 T vs. C 0.158 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs9501076 chr6:31165218 HCG27 [-319bp] C - 12 T vs. C - - <1 (-) 33 (-) >0.05
rs1265156 chr6:31142297 POU5F1 C - 12 A vs. C 0.25 (A) 0.425 (A) >1 (-) 0 (-) >0.05
rs76556746 chr6:31109119 CCHCR1 [-1097bp] C - 12 A vs. G - - <1 (-) 20 (-) >0.05
rs11755601 chr6:31100247 PSORS1C1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs144098353 chr6:31173833 HCG27 [+2088bp] C - 6 A vs. T - - <1 (-) 0 (-) >0.05
rs9263531 chr6:31067565 C6orf15 [-11435bp] C - 12 A vs. G 0.292 (A) - >1 (-) 1 (-) >0.05
rs6903896 chr6:31168029 HCG27 C - 12 A vs. G 0.033 (A) 0.1 (A) >1 (-) 37 (-) >0.05
rs9263530 chr6:31067564 C6orf15 [-11436bp] C - 12 T vs. C 0.292 (C) - <1 (-) 1 (-) >0.05
rs13196034 chr6:31098210 PSORS1C1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2233964 chr6:31080919 C6orf15 [+583bp] C - 12 A vs. G 0.2 (G) 0.333 (G) >1 (-) 20 (-) >0.05
rs9263716 chr6:31095816 PSORS1C1 C - 11 A vs. T 0.125 (T) 0.358 (T) >1 (-) 0 (-) >0.05
rs9263855 chr6:31156994 POU5F1 [+8486bp] C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs1265044 chr6:31090318 PSORS1C1 C - 9 T vs. C - - >1 (-) 29 (-) >0.05
rs9263903 chr6:31175081 HCG27 [+3336bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs13200022 chr6:31098957 PSORS1C1 C - 12 T vs. C 0.108 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs28742574 chr6:31164294 HCG27 [-1243bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs885701 chr6:31143900 POU5F1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs364786 chr6:31144291 POU5F1 C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs28732098 chr6:31091054 PSORS1C1 C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs13212168 chr6:31098193 PSORS1C1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs76061950 chr6:31154878 POU5F1 [+6370bp] C - 12 A vs. G - - <1 (-) 38 (-) >0.05
rs1793899 chr6:31170131 HCG27 C - 12 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs6932086 chr6:31095088 PSORS1C1 C - 12 A vs. G 0.067 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs9501055 chr6:31097052 PSORS1C1 C - 12 A vs. G 0.108 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs2233973 chr6:31080099 C6orf15 C - 12 C vs. G 0.2 (C) 0.183 (C) >1 (-) 26 (-) >0.05
rs1265161 chr6:31137660 POU5F1 C - 12 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05

Association studies for this region [+]