CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2517494 chr6:31073597 C6orf15 [-5403bp] C - 12 C vs. G - - >1 (-) 0 (-) <0.05
rs1052986 chr6:31146439 POU5F1 C - 12 C vs. G 0.108 (C) 0.108 (C) >1 (-) 12 (-) <0.05
rs130078 chr6:31118565 CCHCR1 C - 12 C vs. G 0.308 (C) 0.4 (C) >1 (-) 0 (-) <0.05
rs3130499 chr6:31119889 CCHCR1 C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs9263804 chr6:31135706 POU5F1 C - 12 T vs. C 0.283 (C) 0.392 (C) <1 (-) 0 (-) <0.05
rs3131008 chr6:31098381 PSORS1C1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs2073719 chr6:31112925 CCHCR1 C - 12 T vs. C 0.317 (C) 0.333 (C) <1 (-) 0 (-) <0.05
rs3130454 chr6:31108485 PSORS1C1 [+616bp] C - 11 A vs. G 0.308 (G) 0.35 (G) <1 (-) 0 (-) <0.05
rs6913631 chr6:31152098 POU5F1 [+3590bp] C - 12 A vs. C - - <1 (-) 0 (-) <0.05
rs3132524 chr6:31136714 POU5F1 C - 12 T vs. C 0.283 (T) 0.392 (T) >1 (-) 0 (-) <0.05
rs1265160 chr6:31138371 POU5F1 C - 12 A vs. G - - <1 (-) 36 (-) <0.05
rs3130452 chr6:31123313 CCHCR1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs3130464 chr6:31107245 PSORS1C1 C - 12 A vs. G 0.308 (A) 0.35 (A) >1 (-) 0 (-) <0.05
rs2285803 chr6:31107258 PSORS1C1 C - 12 T vs. C 0.3 (T) 0.35 (T) >1 (-) 0 (-) <0.05
rs130073 chr6:31111180 CCHCR1 C - 12 T vs. C 0.308 (T) 0.35 (T) >1 (-) 0 (-) <0.05
rs3130504 chr6:31137837 POU5F1 C - 11 A vs. T 0.3 (A) 0.4 (A) >1 (-) 0 (-) <0.05
rs3132537 chr6:31114019 CCHCR1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs3734872 chr6:31143804 POU5F1 C - 12 T vs. G 0.108 (G) 0.125 (G) <1 (-) 7 (-) <0.05
rs2240060 chr6:31114900 CCHCR1 C - 12 A vs. G 0.308 (A) 0.35 (A) >1 (-) 0 (-) <0.05
rs3131013 chr6:31115604 CCHCR1 C - 12 T vs. C 0.308 (T) 0.342 (T) >1 (-) 0 (-) <0.05
rs3132535 chr6:31116526 CCHCR1 C - 12 A vs. G 0.325 (A) 0.4 (A) >1 (-) 0 (-) <0.05
rs9263758 chr6:31115874 CCHCR1 C - 12 A vs. G 0.308 (A) 0.35 (A) >1 (-) 0 (-) <0.05
rs3132557 chr6:31106409 PSORS1C1 C - 12 A vs. G 0.375 (G) 0.467 (G) >1 (-) 0 (-) <0.05
rs3130497 chr6:31116649 CCHCR1 C - 12 T vs. C 0.208 (T) - >1 (-) 33 (-) <0.05
rs2073723 chr6:31130078 TCF19 C - 11 T vs. C 0.283 (T) 0.392 (T) >1 (-) 0 (-) <0.05
rs1065461 chr6:31130502 TCF19 C - 11 T vs. C 0.283 (T) 0.392 (T) >1 (-) 0 (-) <0.05
rs2073722 chr6:31129642 TCF19 C - 11 A vs. C 0.25 (A) 0.3 (A) >1 (-) 0 (-) <0.05
rs9295957 chr6:31157593 HCG27 [-7944bp] C - 12 A vs. G 0.175 (A) 0.375 (A) <1 (-) 37 (-) <0.05
rs9295958 chr6:31158184 HCG27 [-7353bp] C - 12 A vs. T 0.175 (A) 0.375 (A) <1 (-) 36 (-) <0.05
rs6941912 chr6:31161571 HCG27 [-3966bp] C - 12 C vs. G 0.175 (C) 0.367 (C) <1 (-) 37 (-) <0.05
rs1265113 chr6:31117577 CCHCR1 C - 12 C vs. G 0.117 (G) 0.242 (G) >1 (-) 39 (-) <0.05
rs1265163 chr6:31134087 TCF19 C - 12 C vs. G 0.117 (G) 0.258 (G) >1 (-) 38 (-) <0.05
rs28360055 chr6:31155304 POU5F1 [+6796bp] C - 12 C vs. G - - >1 (-) 34 (-) <0.05
rs3130933 chr6:31132085 TCF19 C - 12 T vs. C 0.167 (T) 0.033 (T) >1 (-) 35 (-) <0.05
rs3094610 chr6:31165150 HCG27 [-387bp] C - 12 C vs. G - - <1 (-) 28 (-) <0.05
rs9461648 chr6:31142719 POU5F1 C - 12 T vs. C 0.092 (C) 0.125 (C) <1 (-) 14 (-) <0.05
rs9468877 chr6:31142903 POU5F1 C - 12 A vs. G 0.108 (A) 0.125 (A) >1 (-) 14 (-) <0.05
rs9461649 chr6:31143158 POU5F1 C - 12 T vs. C 0.108 (T) 0.125 (T) >1 (-) 14 (-) <0.05
rs4343960 chr6:31156606 POU5F1 [+8098bp] C - 12 A vs. C 0.192 (A) 0.167 (A) >1 (-) 31 (-) <0.05
rs9468885 chr6:31151413 POU5F1 [+2905bp] C - 12 A vs. C - - <1 (-) 0 (-) <0.05
rs9461650 chr6:31143241 POU5F1 C - 12 A vs. G 0.108 (A) 0.2 (A) >1 (-) 24 (-) <0.05
rs9468879 chr6:31143249 POU5F1 C - 12 A vs. C 0.108 (A) 0.125 (A) >1 (-) 24 (-) <0.05
rs2073721 chr6:31129616 TCF19 C - 10 A vs. G 0.283 (A) 0.392 (A) >1 (-) 0 (-) <0.05
rs3130502 chr6:31136666 POU5F1 All: C 103,235 14 A vs. G 0.283 (A) 0.392 (A) 1.05 (1.02-1.09) 0 (0-35) 0.006
rs3095237 chr6:31161347 HCG27 [-4190bp] C - 12 A vs. G 0.192 (A) 0.158 (A) >1 (-) 29 (-) <0.05
rs3130460 chr6:31160188 HCG27 [-5349bp] C - 12 A vs. G - - >1 (-) 28 (-) <0.05
rs3095238 chr6:31161210 HCG27 [-4327bp] C - 12 T vs. G 0.192 (T) 0.158 (T) >1 (-) 28 (-) <0.05
rs4713441 chr6:31155284 POU5F1 [+6776bp] C - 12 A vs. T - - >1 (-) 35 (-) <0.05
rs3094189 chr6:31141970 POU5F1 C - 12 A vs. C 0.175 (C) 0.05 (C) <1 (-) 28 (-) <0.05
rs11507946 chr6:31145733 POU5F1 C - 11 A vs. T - - <1 (-) 0 (-) <0.05

Association studies for this region [+]