CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3130954 chr6:31172937 HCG27 [+1192bp] C - 12 A vs. G 0.175 (G) 0.033 (G) <1 (-) 29 (-) <0.05
rs3094663 chr6:31107087 PSORS1C1 C - 11 T vs. C 0.308 (T) 0.35 (T) >1 (-) 0 (-) <0.05
rs3132507 chr6:31175613 HCG27 [+3868bp] C - 12 A vs. C 0.192 (A) - >1 (-) 26 (-) <0.05
rs3734869 chr6:31143639 POU5F1 C - 12 A vs. G 0.133 (A) 0.133 (A) >1 (-) 0 (-) <0.05
rs3134789 chr6:31144695 POU5F1 C - 12 T vs. C 0.192 (T) - >1 (-) 28 (-) <0.05
rs3131017 chr6:31147081 POU5F1 C - 12 T vs. C 0.192 (C) 0.175 (C) <1 (-) 29 (-) <0.05
rs150984561 chr6:31169477 HCG27 C - 12 A vs. G - - >1 (-) 22 (-) <0.05
rs9500880 chr6:31159728 HCG27 [-5809bp] C - 12 A vs. G - - >1 (-) 7 (-) <0.05
rs115374779 chr6:31164727 HCG27 [-810bp] C - 12 T vs. C 0.033 (T) 0.092 (T) >1 (-) 21 (-) <0.05
rs114141192 chr6:31165843 HCG27 C - 12 T vs. C 0.033 (T) 0.092 (T) >1 (-) 21 (-) <0.05
rs4122190 chr6:31167852 HCG27 C - 12 A vs. G - 0.133 (G) >1 (-) 0 (-) <0.05
rs28483421 chr6:31167470 HCG27 C - 12 T vs. C - 0.133 (T) <1 (-) 0 (-) <0.05
rs28749551 chr6:31163972 HCG27 [-1565bp] C - 12 C vs. G - - <1 (-) 44 (-) <0.05
rs9366770 chr6:31170228 HCG27 C - 12 C vs. G 0.358 (C) 0.467 (G) <1 (-) 3 (-) <0.05
rs6922077 chr6:31163791 HCG27 [-1746bp] C - 12 C vs. G 0.192 (C) 0.392 (C) <1 (-) 33 (-) <0.05
rs62987162 chr6:31167696 HCG27 C - 12 C vs. G - - <1 (-) 32 (-) <0.05
rs3094193 chr6:31137774 POU5F1 C - 12 T vs. G 0.467 (G) 0.4 (G) <1 (-) 15 (-) <0.05
rs28749550 chr6:31159911 HCG27 [-5626bp] C - 12 A vs. G 0.175 (G) 0.25 (G) >1 (-) 40 (-) <0.05
rs3132508 chr6:31174796 HCG27 [+3051bp] C - 12 T vs. G - - <1 (-) 29 (-) <0.05
rs3131012 chr6:31115441 CCHCR1 C - 12 T vs. C 0.483 (T) 0.467 (T) >1 (-) 0 (-) <0.05
rs2240064 chr6:31114573 CCHCR1 C - 12 A vs. G 0.483 (G) 0.45 (G) <1 (-) 0 (-) <0.05
rs915660 chr6:31143835 POU5F1 C - 12 C vs. G 0.175 (G) 0.375 (G) >1 (-) 39 (-) <0.05
rs3132533 chr6:31117578 CCHCR1 C - 12 A vs. G 0.458 (A) 0.433 (A) >1 (-) 16 (-) <0.05
rs9501350 chr6:31152839 POU5F1 [+4331bp] C - 12 T vs. C - 0.025 (T) >1 (-) 5 (-) <0.05
rs7772153 chr6:31154261 POU5F1 [+5753bp] C - 11 A vs. G - 0.133 (A) <1 (-) 0 (-) <0.05
rs7771486 chr6:31153886 POU5F1 [+5378bp] C - 11 C vs. G - 0.125 (C) <1 (-) 0 (-) <0.05
rs148870053 chr6:31115164 CCHCR1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs9405015 chr6:31155803 POU5F1 [+7295bp] C - 11 T vs. C - 0.133 (T) <1 (-) 0 (-) <0.05
rs9368660 chr6:31155944 POU5F1 [+7436bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs9348855 chr6:31151808 POU5F1 [+3300bp] C - 11 A vs. C - 0.133 (C) >1 (-) 0 (-) <0.05
rs9378226 chr6:31158050 HCG27 [-7487bp] C - 11 A vs. G - 0.117 (G) >1 (-) 0 (-) <0.05
rs9357114 chr6:31149298 POU5F1 [+790bp] C - 11 T vs. G - 0.133 (G) >1 (-) 0 (-) <0.05
rs9357112 chr6:31148859 POU5F1 [+351bp] C - 11 A vs. G - - >1 (-) 0 (-) <0.05
rs1265099 chr6:31105413 PSORS1C1 C - 12 A vs. G 0.375 (G) 0.483 (A) >1 (-) 38 (-) <0.05
rs4713439 chr6:31147026 POU5F1 C - 11 A vs. G - 0.133 (G) >1 (-) 0 (-) <0.05
rs79499809 chr6:31081485 PSORS1C1 [-1042bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs117672584 chr6:31151810 POU5F1 [+3302bp] C - 12 A vs. G - 0.092 (A) >1 (-) 11 (-) <0.05
rs56205037 chr6:31120768 CCHCR1 C - 12 T vs. C 0.075 (T) 0.042 (T) >1 (-) 28 (-) <0.05
rs117960312 chr6:31151761 POU5F1 [+3253bp] C - 12 T vs. C - 0.092 (T) >1 (-) 10 (-) <0.05
rs3130456 chr6:31126252 TCF19 [-67bp] C - 12 A vs. C 0.458 (C) 0.425 (C) <1 (-) 24 (-) <0.05
rs3132517 chr6:31141836 POU5F1 C - 12 T vs. C 0.25 (C) 0.167 (C) <1 (-) 0 (-) <0.05
rs2073717 chr6:31122126 CCHCR1 C - 12 C vs. G 0.458 (G) 0.433 (G) <1 (-) 18 (-) <0.05
rs114475062 chr6:31127745 TCF19 C - 12 A vs. C 0.042 (A) 0.033 (A) >1 (-) 0 (-) <0.05
rs743401 chr6:31125158 CCHCR1 C - 11 T vs. C 0.458 (C) 0.425 (C) <1 (-) 29 (-) <0.05
rs17190769 chr6:31127037 TCF19 C - 12 T vs. C 0.033 (T) 0.092 (T) >1 (-) 0 (-) <0.05
rs2239524 chr6:31125569 CCHCR1 C - 11 T vs. G 0.475 (T) 0.425 (T) >1 (-) 29 (-) <0.05
rs9378227 chr6:31163582 HCG27 [-1955bp] C - 12 C vs. G - - >1 (-) 32 (-) <0.05
rs9263761 chr6:31116739 CCHCR1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs2240063 chr6:31114745 CCHCR1 C - 12 T vs. C 0.483 (T) 0.442 (T) >1 (-) 0 (-) <0.05
rs3132520 chr6:31140008 POU5F1 C - 12 T vs. C 0.483 (T) 0.375 (T) <1 (-) 0 (-) <0.05

Association studies for this region [+]