CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28749548 chr6:31150914 POU5F1 [+2406bp] C - 12 A vs. T - - <1 (-) 40 (-) >0.05
rs78624384 chr6:31078159 C6orf15 [-841bp] C - 4 T vs. C - 0.033 (T) >1 (-) 0 (-) >0.05
rs60851386 chr6:31161404 HCG27 [-4133bp] C - 12 T vs. C 0.075 (T) 0.033 (T) >1 (-) 23 (-) >0.05
rs9295959 chr6:31159041 HCG27 [-6496bp] C - 12 A vs. G - - >1 (-) 22 (-) >0.05
rs3130975 chr6:31081838 PSORS1C1 [-689bp] C - 12 T vs. C 0.375 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs2894181 chr6:31174527 HCG27 [+2782bp] C - 12 A vs. G 0.492 (G) 0.367 (G) >1 (-) 0 (-) >0.05
rs17197375 chr6:31154040 POU5F1 [+5532bp] C - 12 T vs. C 0.05 (T) 0.033 (T) >1 (-) 21 (-) >0.05
rs9468881 chr6:31150870 POU5F1 [+2362bp] C - 12 T vs. C - - >1 (-) 21 (-) >0.05
rs4711258 chr6:31150383 POU5F1 [+1875bp] C - 12 A vs. G 0.067 (A) - >1 (-) 21 (-) >0.05
rs9468887 chr6:31151690 POU5F1 [+3182bp] C - 12 C vs. G - - <1 (-) 21 (-) >0.05
rs4713445 chr6:31161000 HCG27 [-4537bp] C - 12 A vs. G - - >1 (-) 22 (-) >0.05
rs9461653 chr6:31160553 HCG27 [-4984bp] C - 12 A vs. G 0.075 (G) 0.033 (G) <1 (-) 22 (-) >0.05
rs12529498 chr6:31160211 HCG27 [-5326bp] C - 12 A vs. G - - <1 (-) 22 (-) >0.05
rs6914030 chr6:31175096 HCG27 [+3351bp] C - 12 T vs. C - - <1 (-) 33 (-) >0.05
rs9501070 chr6:31164224 HCG27 [-1313bp] C - 12 C vs. G 0.075 (G) 0.025 (G) <1 (-) 24 (-) >0.05
rs77388194 chr6:31074203 C6orf15 [-4797bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs1265086 chr6:31109882 CCHCR1 [-334bp] C - 12 T vs. G 0.5 (G) 0.358 (T) <1 (-) 0 (-) >0.05
rs9501505 chr6:31152734 POU5F1 [+4226bp] C - 12 A vs. G - - <1 (-) 21 (-) >0.05
rs1265067 chr6:31116142 CCHCR1 C - 12 A vs. G 0.3 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs3130978 chr6:31082188 PSORS1C1 [-339bp] C - 12 A vs. G 0.375 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs78429324 chr6:31166239 HCG27 C - 12 T vs. C 0.05 (T) 0.025 (T) >1 (-) 24 (-) >0.05
rs1265114 chr6:31117188 CCHCR1 C - 12 T vs. C 0.292 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs1265112 chr6:31118019 CCHCR1 C - 12 T vs. C 0.292 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs74372121 chr6:31164116 HCG27 [-1421bp] C - 4 C vs. G - - <1 (-) 0 (-) >0.05
rs3130979 chr6:31082197 PSORS1C1 [-330bp] C - 12 C vs. G 0.375 (C) 0.208 (C) <1 (-) 0 (-) >0.05
rs3132546 chr6:31088579 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs3130977 chr6:31081989 PSORS1C1 [-538bp] C - 12 T vs. C 0.383 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs9295961 chr6:31167498 HCG27 C - 12 T vs. C 0.075 (C) 0.033 (C) <1 (-) 23 (-) >0.05
rs1265111 chr6:31119380 CCHCR1 C - 12 A vs. G 0.292 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs1265079 chr6:31112108 CCHCR1 C - 12 T vs. G 0.292 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs886389 chr6:31166887 HCG27 C - 12 T vs. G 0.075 (T) - >1 (-) 23 (-) >0.05
rs1265069 chr6:31115700 CCHCR1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs1265076 chr6:31113083 CCHCR1 C - 12 A vs. G 0.292 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs140174668 chr6:31168842 HCG27 C - 12 T vs. C - - >1 (-) 21 (-) >0.05
rs6905862 chr6:31127602 TCF19 C - 12 A vs. G 0.417 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs3130552 chr6:31082127 PSORS1C1 [-400bp] C - 12 A vs. G 0.317 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs9468889 chr6:31155385 POU5F1 [+6877bp] C - 12 T vs. G - - <1 (-) 25 (-) >0.05
rs1265078 chr6:31112602 CCHCR1 C - 12 C vs. G 0.292 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs6913470 chr6:31174662 HCG27 [+2917bp] C - 12 A vs. G - - <1 (-) 7 (-) >0.05
rs9263868 chr6:31168397 HCG27 C - 12 A vs. G 0.192 (A) 0.092 (A) >1 (-) 41 (-) >0.05
rs2517985 chr6:31118942 CCHCR1 C - 12 T vs. C 0.292 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs9263626 chr6:31075622 C6orf15 [-3378bp] C - 12 T vs. C 0.467 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs885952 chr6:31139490 POU5F1 C - 12 T vs. C 0.417 (T) 0.342 (T) <1 (-) 18 (-) >0.05
rs112434986 chr6:31154814 POU5F1 [+6306bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs9468884 chr6:31151319 POU5F1 [+2811bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs1265103 chr6:31100978 PSORS1C1 C - 11 T vs. C 0.05 (T) - <1 (-) 18 (-) >0.05
rs3094204 chr6:31091992 PSORS1C1 C - 11 A vs. G 0.458 (G) 0.3 (A) >1 (-) 0 (-) >0.05
rs115513668 chr6:31134033 TCF19 C - 11 A vs. T 0.033 (T) - <1 (-) 0 (-) >0.05
rs2517529 chr6:31076978 C6orf15 [-2022bp] C - 12 C vs. G 0.475 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs147539478 chr6:31123434 CCHCR1 C - 4 A vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]