CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9263789 chr6:31128329 TCF19 C - 12 A vs. G - - <1 (-) 12 (-) >0.05
rs13409 chr6:31132140 TCF19 C - 12 A vs. G 0.417 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs9468883 chr6:31151042 POU5F1 [+2534bp] C - 12 A vs. T 0.05 (A) - >1 (-) 14 (-) >0.05
rs2394415 chr6:31070686 C6orf15 [-8314bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs1419881 chr6:31130593 TCF19 C - 12 A vs. G 0.45 (A) 0.475 (G) <1 (-) 3 (-) >0.05
rs9263621 chr6:31073047 C6orf15 [-5953bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9501351 chr6:31153126 POU5F1 [+4618bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9501506 chr6:31153573 POU5F1 [+5065bp] C - 12 T vs. C 0.1 (C) - <1 (-) 0 (-) >0.05
rs4713440 chr6:31150323 POU5F1 [+1815bp] C - 12 A vs. C 0.1 (A) - >1 (-) 0 (-) >0.05
rs6913894 chr6:31151997 POU5F1 [+3489bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs149432671 chr6:31156350 POU5F1 [+7842bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs3095307 chr6:31092049 PSORS1C1 C - 12 C vs. G 0.458 (C) 0.333 (G) <1 (-) 0 (-) >0.05
rs3130453 chr6:31124849 CCHCR1 C - 12 T vs. C 0.442 (T) 0.358 (T) <1 (-) 24 (-) >0.05
rs17197402 chr6:31154384 POU5F1 [+5876bp] C - 12 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs3094187 chr6:31126944 TCF19 C - 12 T vs. C 0.475 (T) 0.458 (C) <1 (-) 21 (-) >0.05
rs3095239 chr6:31126790 TCF19 C - 12 A vs. G 0.475 (G) 0.458 (A) >1 (-) 21 (-) >0.05
rs112640945 chr6:31117673 CCHCR1 C - 11 T vs. C 0.067 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs113932411 chr6:31117695 CCHCR1 C - 11 A vs. G 0.058 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs1265092 chr6:31107317 PSORS1C1 C - 12 T vs. C 0.3 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs2844637 chr6:31072300 C6orf15 [-6700bp] C - 12 T vs. C 0.317 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs6907451 chr6:31173860 HCG27 [+2115bp] C - 12 A vs. G 0.2 (G) 0.258 (G) >1 (-) 14 (-) >0.05
rs6930438 chr6:31173886 HCG27 [+2141bp] C - 12 T vs. G 0.2 (G) 0.258 (G) >1 (-) 16 (-) >0.05
rs9391817 chr6:31147475 POU5F1 C - 6 T vs. C - - <1 (-) 36 (-) >0.05
rs7453202 chr6:31172225 HCG27 [+480bp] C - 12 A vs. G - - <1 (-) 16 (-) >0.05
rs3132526 chr6:31134175 TCF19 C - 12 T vs. C - - <1 (-) 21 (-) >0.05
rs17197540 chr6:31172044 HCG27 [+299bp] C - 12 T vs. C 0.2 (C) 0.258 (C) >1 (-) 16 (-) >0.05
rs3130560 chr6:31097453 PSORS1C1 C - 12 T vs. G 0.283 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs56178408 chr6:31150039 POU5F1 [+1531bp] C - 12 T vs. C 0.108 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs130066 chr6:31122315 CCHCR1 C - 12 C vs. G 0.442 (C) 0.333 (C) <1 (-) 0 (-) >0.05
rs1135811 chr6:31171598 HCG27 C - 12 T vs. C 0.2 (C) 0.25 (C) >1 (-) 16 (-) >0.05
rs1419880 chr6:31135197 POU5F1 C - 12 T vs. C 0.475 (C) 0.467 (T) >1 (-) 21 (-) >0.05
rs3094195 chr6:31135966 POU5F1 C - 12 T vs. C - - <1 (-) 20 (-) >0.05
rs2021375 chr6:31135387 POU5F1 C - 12 A vs. G - - >1 (-) 20 (-) >0.05
rs3130558 chr6:31097183 PSORS1C1 C - 12 C vs. G 0.283 (C) 0.117 (C) >1 (-) 2 (-) >0.05
rs3131009 chr6:31098832 PSORS1C1 C - 12 A vs. G 0.292 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs6913863 chr6:31175015 HCG27 [+3270bp] C - 12 A vs. C 0.2 (A) 0.242 (A) <1 (-) 14 (-) >0.05
rs2233978 chr6:31079703 C6orf15 C - 12 C vs. G 0.075 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs62400570 chr6:31072950 C6orf15 [-6050bp] C - 10 A vs. G - 0.017 (A) >1 (-) 0 (-) >0.05
rs115600475 chr6:31117381 CCHCR1 C - 10 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs17191040 chr6:31154206 POU5F1 [+5698bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs17190776 chr6:31130865 TCF19 C - 12 A vs. G 0.067 (A) - <1 (-) 0 (-) >0.05
rs57140518 chr6:31075342 C6orf15 [-3658bp] C - 5 T vs. C - 0.025 (T) >1 (-) 24 (-) >0.05
rs116909634 chr6:31076771 C6orf15 [-2229bp] C - 5 T vs. G - 0.025 (T) >1 (-) 24 (-) >0.05
rs9501507 chr6:31153716 POU5F1 [+5208bp] C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs113722972 chr6:31070486 C6orf15 [-8514bp] C - 5 A vs. G - 0.025 (G) <1 (-) 23 (-) >0.05
rs3131005 chr6:31095864 PSORS1C1 C - 12 A vs. G 0.292 (G) 0.125 (G) <1 (-) 0 (-) >0.05
rs144886805 chr6:31081986 PSORS1C1 [-541bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs113108526 chr6:31095942 PSORS1C1 C - 12 A vs. G 0.067 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs113542024 chr6:31135777 POU5F1 C - 12 T vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs3132568 chr6:31101917 PSORS1C1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]