EBF4, chr20:2673524-2740753 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6050864 chr20:2626848 TMC2 [+4418bp] C - 13 T vs. C 0.4 (C) 0.108 (C) <1 (-) 44 (-) >0.05
rs2325897 chr20:2626541 TMC2 [+4111bp] C - 13 T vs. C 0.4 (C) 0.108 (C) <1 (-) 44 (-) >0.05
rs11699813 chr20:2679492 EBF4 C - 13 A vs. G 0.117 (A) 0.308 (A) <1 (-) 0 (-) >0.05
rs6115655 chr20:2717315 EBF4 C - 9 A vs. T 0.033 (A) 0.125 (A) >1 (-) 39 (-) >0.05
rs4813580 chr20:2624103 TMC2 [+1673bp] C - 13 A vs. C 0.4 (C) 0.125 (C) <1 (-) 45 (-) >0.05
rs4539857 chr20:2626230 TMC2 [+3800bp] C - 13 A vs. G 0.4 (G) 0.092 (G) <1 (-) 44 (-) >0.05
rs11698079 chr20:2757335 EBF4 [+16582bp] C - 13 A vs. G - - >1 (-) 9 (-) >0.05
rs6083932 chr20:2625211 TMC2 [+2781bp] C - 13 T vs. C 0.4 (T) 0.108 (T) >1 (-) 45 (-) >0.05
rs2038244 chr20:2627648 NOP56 [-5143bp] C - 13 A vs. C 0.4 (C) 0.083 (C) <1 (-) 44 (-) >0.05
rs2038245 chr20:2627638 NOP56 [-5153bp] C - 13 A vs. G 0.4 (G) 0.108 (G) <1 (-) 44 (-) >0.05
rs6037224 chr20:2625669 TMC2 [+3239bp] C - 13 A vs. C 0.4 (C) 0.108 (C) <1 (-) 44 (-) >0.05
rs6037336 chr20:2667729 EBF4 [-5795bp] C - 12 T vs. C 0.133 (C) 0.35 (C) >1 (-) 15 (-) >0.05
rs2325894 chr20:2625910 TMC2 [+3480bp] C - 13 T vs. C 0.4 (C) 0.108 (C) <1 (-) 44 (-) >0.05
rs215551 chr20:2785279 CPXM1 [+3996bp] C - 13 T vs. C 0.2 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs114139830 chr20:2732532 EBF4 C - 13 C vs. G 0.108 (C) - >1 (-) 0 (-) >0.05
rs2422820 chr20:2626940 TMC2 [+4510bp] C - 13 A vs. G 0.4 (A) 0.108 (A) >1 (-) 43 (-) >0.05
rs215552 chr20:2785747 CPXM1 [+4464bp] C - 13 T vs. C 0.2 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs6050865 chr20:2626936 TMC2 [+4506bp] C - 13 T vs. G 0.417 (G) 0.108 (G) <1 (-) 43 (-) >0.05
rs141120138 chr20:2782913 CPXM1 [+1630bp] C - 5 A vs. G - - <1 (-) 17 (-) >0.05
rs1033519 chr20:2742668 EBF4 [+1915bp] C - 12 T vs. G 0.292 (G) 0.45 (T) <1 (-) 8 (-) >0.05
rs145290172 chr20:2639884 IDH3B C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs56254520 chr20:2718080 EBF4 C - 8 A vs. G 0.033 (A) - >1 (-) 8 (-) >0.05
rs73892666 chr20:2730776 EBF4 C - 13 T vs. G 0.125 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs4813582 chr20:2626275 TMC2 [+3845bp] C - 13 T vs. C 0.4 (T) - >1 (-) 44 (-) >0.05
rs4813601 chr20:2662960 EBF4 [-10564bp] C - 6 A vs. G - - >1 (-) 45 (-) >0.05
rs4286343 chr20:2625886 TMC2 [+3456bp] C - 13 A vs. G 0.4 (G) 0.117 (G) <1 (-) 44 (-) >0.05
rs6083954 chr20:2632976 NOP56 C - 13 A vs. T 0.417 (A) 0.392 (T) <1 (-) 28 (-) >0.05
rs8116111 chr20:2699052 EBF4 C - 9 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs127076 chr20:2778075 CPXM1 C - 12 T vs. C 0.042 (T) 0.0 (T) <1 (-) 0 (-) >0.05
rs13042775 chr20:2690383 EBF4 C - 13 A vs. G 0.092 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs13040535 chr20:2679399 EBF4 C - 13 A vs. G 0.117 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs215533 chr20:2768391 CPXM1 [-6324bp] C - 13 A vs. T 0.367 (A) 0.492 (A) <1 (-) 30 (-) >0.05
rs75566675 chr20:2765782 CPXM1 [-8933bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs112907936 chr20:2754378 EBF4 [+13625bp] C - 13 A vs. G - - >1 (-) 3 (-) >0.05
rs2281317 chr20:2751091 EBF4 [+10338bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs6037346 chr20:2679409 EBF4 C - 12 T vs. C 0.183 (T) 0.5 (T) <1 (-) 0 (-) >0.05
rs215538 chr20:2774629 CPXM1 [-86bp] C - 13 A vs. T 0.175 (A) 0.358 (A) <1 (-) 0 (-) >0.05
rs147223281 chr20:2763982 CPXM1 [-10733bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3827073 chr20:2632328 NOP56 [-463bp] C - 13 T vs. C 0.408 (T) 0.367 (C) <1 (-) 30 (-) >0.05
rs4815466 chr20:2631806 NOP56 [-985bp] C - 13 A vs. G 0.408 (A) 0.342 (G) <1 (-) 30 (-) >0.05
rs6138892 chr20:2755488 EBF4 [+14735bp] C - 13 T vs. C 0.225 (C) 0.125 (C) >1 (-) 4 (-) >0.05
rs4813587 chr20:2632212 NOP56 [-579bp] C - 13 T vs. C 0.408 (C) 0.367 (T) >1 (-) 31 (-) >0.05
rs2073125 chr20:2739583 EBF4 C - 13 T vs. C 0.333 (C) 0.358 (C) >1 (-) 0 (-) >0.05
rs1028409 chr20:2721844 EBF4 C - 12 C vs. G 0.342 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs4296498 chr20:2631269 NOP56 [-1522bp] C - 13 C vs. G 0.408 (C) 0.367 (G) <1 (-) 32 (-) >0.05
rs8114899 chr20:2691861 EBF4 C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs73074931 chr20:2722926 EBF4 C - 13 C vs. G 0.125 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs127078 chr20:2775332 CPXM1 C - 13 T vs. C 0.175 (C) 0.358 (C) >1 (-) 0 (-) >0.05
rs16990611 chr20:2728570 EBF4 C - 13 A vs. G 0.125 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs12479588 chr20:2648125 IDH3B [+3260bp] C - 13 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.