EBF4, chr20:2673524-2740753 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05
rs2092655 chr20:2626050 TMC2 [+3620bp] C - 13 A vs. G 0.183 (A) - >1 (-) 37 (-) <0.05
rs4815454 chr20:2624376 TMC2 [+1946bp] C - 13 A vs. G 0.183 (A) - >1 (-) 37 (-) <0.05
rs113594194 chr20:2626876 TMC2 [+4446bp] C - 13 A vs. G 0.183 (A) - >1 (-) 38 (-) <0.05
rs7269323 chr20:2627197 TMC2 [+4767bp] C - 13 T vs. C 0.183 (C) - <1 (-) 38 (-) <0.05
rs2092656 chr20:2625850 TMC2 [+3420bp] C - 13 A vs. T 0.183 (T) - <1 (-) 37 (-) <0.05
rs74370935 chr20:2625458 TMC2 [+3028bp] C - 13 C vs. G 0.183 (C) - >1 (-) 37 (-) <0.05
rs74681083 chr20:2623992 TMC2 [+1562bp] C - 13 A vs. C 0.183 (C) - <1 (-) 37 (-) <0.05
rs79001633 chr20:2626462 TMC2 [+4032bp] C - 13 T vs. C 0.183 (C) - <1 (-) 38 (-) <0.05
rs112911492 chr20:2627936 NOP56 [-4855bp] C - 13 T vs. C 0.183 (C) - <1 (-) 32 (-) <0.05
rs149630886 chr20:2627947 NOP56 [-4844bp] C - 13 A vs. G - - >1 (-) 32 (-) <0.05
rs6115288 chr20:2628987 NOP56 [-3804bp] C - 13 A vs. C 0.175 (A) - >1 (-) 39 (-) <0.05
rs7271340 chr20:2628109 NOP56 [-4682bp] C - 13 T vs. C 0.183 (C) - <1 (-) 39 (-) <0.05
rs725726 chr20:2628791 NOP56 [-4000bp] C - 13 C vs. G 0.183 (C) - >1 (-) 38 (-) <0.05
rs112741509 chr20:2629135 NOP56 [-3656bp] C - 13 C vs. G - - >1 (-) 40 (-) <0.05
rs6115290 chr20:2629047 NOP56 [-3744bp] C - 13 A vs. G - - <1 (-) 38 (-) <0.05
rs725725 chr20:2628863 NOP56 [-3928bp] C - 13 A vs. G 0.175 (G) - <1 (-) 38 (-) <0.05
rs118101850 chr20:2629186 NOP56 [-3605bp] C - 13 A vs. C 0.175 (A) - >1 (-) 40 (-) <0.05
rs6050878 chr20:2629188 NOP56 [-3603bp] C - 13 C vs. G 0.175 (G) - <1 (-) 40 (-) <0.05
rs139785476 chr20:2683526 EBF4 C - 3 A vs. G - - >1 (-) 43 (-) <0.05
rs6132968 chr20:2783121 CPXM1 [+1838bp] C - 13 A vs. G 0.392 (G) 0.425 (A) >1 (-) 0 (-) <0.05
rs6084176 chr20:2784406 CPXM1 [+3123bp] C - 13 A vs. C 0.392 (A) 0.417 (C) <1 (-) 0 (-) <0.05
rs6037416 chr20:2784925 CPXM1 [+3642bp] C - 13 A vs. G 0.392 (G) 0.417 (A) >1 (-) 0 (-) <0.05
rs11087556 chr20:2785598 CPXM1 [+4315bp] C - 13 A vs. G 0.392 (G) 0.417 (A) >1 (-) 0 (-) <0.05
rs4815537 chr20:2699422 EBF4 C - 13 T vs. C 0.1 (C) - <1 (-) 0 (-) <0.05
rs11697820 chr20:2781441 CPXM1 [+158bp] C - 13 T vs. C 0.408 (C) 0.4 (T) >1 (-) 0 (-) <0.05
rs742707 chr20:2777828 CPXM1 C - 13 T vs. G 0.4 (G) 0.433 (T) >1 (-) 0 (-) <0.05
rs215519 chr20:2758377 CPXM1 [-16338bp] C - 13 A vs. G 0.483 (A) 0.175 (G) <1 (-) 0 (-) <0.05
rs215517 chr20:2756896 EBF4 [+16143bp] C - 13 T vs. C 0.483 (T) 0.158 (C) <1 (-) 0 (-) <0.05
rs6138678 chr20:2633296 NOP56 C - 13 C vs. G 0.2 (C) - >1 (-) 40 (-) <0.05
rs4815538 chr20:2701032 EBF4 C - 13 A vs. G 0.1 (A) - >1 (-) 0 (-) <0.05
rs215518 chr20:2757537 EBF4 [+16784bp] C - 13 A vs. G 0.483 (G) 0.175 (A) >1 (-) 0 (-) <0.05
rs6051368 chr20:2744846 EBF4 [+4093bp] C - 13 T vs. C 0.483 (C) 0.208 (T) >1 (-) 0 (-) <0.05
rs127073 chr20:2787994 CPXM1 [+6711bp] C - 13 A vs. G 0.425 (A) 0.4 (G) <1 (-) 0 (-) <0.05
rs85166 chr20:2788274 CPXM1 [+6991bp] C - 13 T vs. C 0.417 (C) 0.4 (T) >1 (-) 0 (-) <0.05
rs117351323 chr20:2752170 EBF4 [+11417bp] C - 10 A vs. C 0.017 (A) - >1 (-) 0 (-) <0.05
rs215556 chr20:2788897 TMEM239 [-6717bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs7273259 chr20:2767262 CPXM1 [-7453bp] C - 13 A vs. G 0.433 (A) 0.267 (A) >1 (-) 0 (-) <0.05
rs117658905 chr20:2762549 CPXM1 [-12166bp] C - 5 A vs. G 0.008 (G) - <1 (-) 47 (-) <0.05
rs6037397 chr20:2755060 EBF4 [+14307bp] C - 13 T vs. C 0.075 (T) 0.45 (T) <1 (-) 0 (-) <0.05
rs6037396 chr20:2754867 EBF4 [+14114bp] C - 13 T vs. C 0.075 (C) 0.45 (C) >1 (-) 0 (-) <0.05
rs6051389 chr20:2763122 CPXM1 [-11593bp] C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs6132905 chr20:2647040 IDH3B [+2175bp] C - 13 A vs. G 0.225 (G) 0.242 (G) <1 (-) 27 (-) <0.05
rs7260969 chr20:2645960 IDH3B [+1095bp] C - 13 A vs. G - - >1 (-) 27 (-) <0.05
rs73606159 chr20:2648196 IDH3B [+3331bp] C - 13 A vs. G 0.217 (A) 0.208 (A) >1 (-) 30 (-) <0.05
rs215520 chr20:2759013 CPXM1 [-15702bp] C - 13 T vs. C 0.467 (T) 0.475 (C) <1 (-) 0 (-) <0.05
rs35371067 chr20:2757408 EBF4 [+16655bp] C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs6051376 chr20:2754335 EBF4 [+13582bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs215523 chr20:2760705 CPXM1 [-14010bp] C - 13 A vs. G 0.467 (G) 0.467 (A) >1 (-) 0 (-) <0.05
rs117062635 chr20:2688402 EBF4 C - 5 A vs. G 0.017 (A) - >1 (-) 67 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.