FAM171A2, chr17:42430583-42441243 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs850732 chr17:42454243 ITGA2B All: C 105,041 14 C vs. T - - 0.92 (0.89-0.95) 0 (0-42) 2.33e-06
Meta_image?name=rs850732

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7223967 chr17:42460258 ITGA2B C - 12 A vs. C 0.033 (A) - <1 (-) 37 (-) >0.05
rs12942600 chr17:42399754 SLC25A39 C - 12 T vs. C - - <1 (-) 10 (-) >0.05
rs9890900 chr17:42460097 ITGA2B C - 12 T vs. C 0.033 (C) - >1 (-) 38 (-) >0.05
rs34365655 chr17:42398802 SLC25A39 C - 11 A vs. G 0.083 (A) - >1 (-) 0 (-) >0.05
rs35941271 chr17:42436220 FAM171A2 C - 11 A vs. G 0.042 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs112153156 chr17:42399223 SLC25A39 C - 12 T vs. C 0.025 (T) - <1 (-) 12 (-) >0.05
rs117222712 chr17:42421612 GRN [-1002bp] C - 12 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs117432945 chr17:42447569 ITGA2B [-1979bp] C - 12 T vs. C 0.033 (T) - <1 (-) 35 (-) >0.05
rs72824741 chr17:42462106 ITGA2B C - 12 C vs. G 0.033 (C) - <1 (-) 39 (-) >0.05
rs116934302 chr17:42388322 RUNDC3A C - 12 T vs. C 0.025 (T) 0.017 (T) <1 (-) 21 (-) >0.05
rs116934410 chr17:42398157 SLC25A39 C - 12 T vs. C - 0.017 (T) <1 (-) 20 (-) >0.05
rs147818740 chr17:42386812 RUNDC3A C - 12 A vs. G - - >1 (-) 21 (-) >0.05
rs2045087 chr17:42482291 GPATCH8 C - 13 A vs. G 0.483 (G) 0.475 (G) <1 (-) 0 (-) >0.05
rs143631282 chr17:42381794 RNU6-453P [-2662bp] C - 12 A vs. G - - <1 (-) 21 (-) >0.05
rs7359702 chr17:42485713 GPATCH8 C - 12 T vs. C 0.042 (T) - <1 (-) 41 (-) >0.05
rs12602832 chr17:42396896 SLC25A39 [-97bp] C - 11 T vs. C 0.067 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs11079122 chr17:42485044 GPATCH8 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs138923678 chr17:42485225 GPATCH8 C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs71371993 chr17:42437000 FAM171A2 C - 9 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs71371995 chr17:42454342 ITGA2B C - 9 A vs. G - 0.025 (G) <1 (-) 12 (-) >0.05
rs11804694 chr17:42447143 ITGA2B [-2405bp] C - 13 C vs. G - - <1 (-) 14 (-) >0.05
rs114641762 chr17:42417164 GRN [-5450bp] C - 11 A vs. C 0.142 (A) - >1 (-) 0 (-) >0.05
rs2074104 chr17:42393494 RUNDC3A C - 13 T vs. C 0.275 (T) 0.15 (C) >1 (-) 19 (-) >0.05
rs147045311 chr17:42489440 GPATCH8 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs60776742 chr17:42400816 SLC25A39 C - 13 A vs. C 0.375 (A) - >1 (-) 8 (-) >0.05
rs113575323 chr17:42471377 GPATCH8 [-1275bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs11578212 chr17:42446855 ITGA2B [-2693bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs9910236 chr17:42466183 ITGA2B C - 13 T vs. C - - >1 (-) 6 (-) >0.05
rs850727 chr17:42464915 ITGA2B C - 13 T vs. C 0.375 (C) 0.433 (C) <1 (-) 1 (-) >0.05
rs2037958 chr17:42472045 GPATCH8 [-607bp] C - 13 T vs. G 0.375 (T) 0.433 (T) >1 (-) 8 (-) >0.05
rs55758339 chr17:42471631 GPATCH8 [-1021bp] C - 13 A vs. T 0.375 (T) 0.433 (T) <1 (-) 6 (-) >0.05
rs112560326 chr17:42400329 SLC25A39 C - 11 T vs. C 0.042 (T) - <1 (-) 0 (-) >0.05
rs1018358 chr17:42472588 GPATCH8 [-64bp] C - 13 T vs. C 0.375 (C) 0.433 (C) <1 (-) 3 (-) >0.05
rs9903206 chr17:42466043 ITGA2B C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs936019 chr17:42475983 GPATCH8 C - 13 C vs. G 0.375 (G) 0.425 (G) <1 (-) 4 (-) >0.05
rs12603789 chr17:42396105 RUNDC3A [+66bp] C - 11 T vs. C 0.025 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs2121597 chr17:42447281 ITGA2B [-2267bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs141711348 chr17:42401152 SLC25A39 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs1377808 chr17:42483531 GPATCH8 C - 13 A vs. T 0.408 (T) 0.433 (T) <1 (-) 4 (-) >0.05
rs7223275 chr17:42481493 GPATCH8 C - 13 C vs. G 0.375 (C) 0.433 (C) >1 (-) 1 (-) >0.05
rs34359486 chr17:42480313 GPATCH8 C - 9 A vs. G - - >1 (-) 2 (-) >0.05
rs8071944 chr17:42418603 GRN [-4011bp] C - 13 T vs. C 0.267 (T) - >1 (-) 20 (-) >0.05
rs8076720 chr17:42484319 GPATCH8 C - 13 A vs. C 0.375 (C) 0.433 (C) <1 (-) 4 (-) >0.05
rs146744993 chr17:42397592 SLC25A39 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs117705553 chr17:42407359 SLC25A39 [+5121bp] C - 9 T vs. C 0.042 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs2045088 chr17:42483233 GPATCH8 C - 13 A vs. T 0.375 (T) 0.433 (T) <1 (-) 0 (-) >0.05
rs4793088 chr17:42380737 RNU6-453P [-3719bp] C - 13 A vs. C 0.292 (C) 0.367 (A) <1 (-) 13 (-) >0.05
rs117332412 chr17:42464604 ITGA2B C - 11 C vs. G 0.033 (C) - >1 (-) 0 (-) >0.05
rs11655476 chr17:42415772 GRN [-6842bp] C - 13 T vs. C 0.317 (T) 0.15 (C) >1 (-) 22 (-) >0.05
rs4792940 chr17:42482623 GPATCH8 C - 13 A vs. C - - >1 (-) 0 (-) >0.05

Association studies for this region [+]