HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115086750 chr6:32771396 HLA-DOB [-9144bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs9275693 chr6:32687866 HLA-DQA2 [-21253bp] C - 12 A vs. C 0.325 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs28986377 chr6:32752222 HLA-DQB2 [+20911bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs9276239 chr6:32701083 HLA-DQA2 [-8036bp] C - 11 C vs. G 0.308 (G) 0.158 (G) >1 (-) 10 (-) >0.05
rs2395250 chr6:32707566 HLA-DQA2 [-1553bp] C - 11 A vs. G 0.325 (G) 0.225 (A) <1 (-) 2 (-) >0.05
rs9276240 chr6:32701098 HLA-DQA2 [-8021bp] C - 11 T vs. G 0.317 (T) 0.158 (T) <1 (-) 10 (-) >0.05
rs9275689 chr6:32687689 HLA-DQA2 [-21430bp] C - 12 A vs. G 0.3 (G) 0.167 (G) >1 (-) 2 (-) >0.05
rs9276210 chr6:32699904 HLA-DQA2 [-9215bp] C - 11 T vs. G 0.317 (G) 0.158 (G) >1 (-) 8 (-) >0.05
rs9275688 chr6:32687668 HLA-DQA2 [-21451bp] C - 12 A vs. T 0.3 (A) 0.158 (A) <1 (-) 2 (-) >0.05
rs9276238 chr6:32701064 HLA-DQA2 [-8055bp] C - 11 T vs. C - - <1 (-) 11 (-) >0.05
rs9276184 chr6:32699170 HLA-DQA2 [-9949bp] C - 11 T vs. C 0.283 (C) 0.175 (C) >1 (-) 9 (-) >0.05
rs9276162 chr6:32698457 HLA-DQA2 [-10662bp] C - 11 A vs. G 0.3 (G) 0.167 (G) >1 (-) 12 (-) >0.05
rs9501662 chr6:32737007 HLA-DQB2 [+5696bp] C - 8 A vs. G - 0.025 (A) >1 (-) 0 (-) >0.05
rs2857112 chr6:32780294 HLA-DOB [-246bp] C - 12 A vs. T 0.058 (A) - <1 (-) 0 (-) >0.05
rs9275674 chr6:32686806 HLA-DQA2 [-22313bp] C - 10 T vs. C 0.2 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs114140237 chr6:32773748 HLA-DOB [-6792bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs9368741 chr6:32737507 HLA-DQB2 [+6196bp] C - 12 A vs. G 0.225 (A) 0.442 (A) >1 (-) 3 (-) >0.05
rs2857208 chr6:32743103 HLA-DQB2 [+11792bp] C - 12 T vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs35921062 chr6:32774416 HLA-DOB [-6124bp] C - 12 T vs. C 0.042 (T) - <1 (-) 20 (-) >0.05
rs9275682 chr6:32687297 HLA-DQA2 [-21822bp] C - 10 A vs. G 0.2 (G) 0.058 (G) <1 (-) 0 (-) >0.05
rs9276011 chr6:32694692 HLA-DQA2 [-14427bp] C - 10 A vs. G 0.15 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs9275753 chr6:32689122 HLA-DQA2 [-19997bp] C - 12 T vs. C 0.3 (C) 0.158 (C) >1 (-) 13 (-) >0.05
rs75797445 chr6:32747073 HLA-DQB2 [+15762bp] C - 6 T vs. C - - <1 (-) 28 (-) >0.05
rs4394272 chr6:32717771 MIR3135B [+15bp] C - 11 T vs. C 0.083 (T) - <1 (-) 16 (-) >0.05
rs9276002 chr6:32694540 HLA-DQA2 [-14579bp] C - 10 T vs. C 0.15 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs12190295 chr6:32706950 HLA-DQA2 [-2169bp] C - 11 C vs. G 0.35 (G) 0.242 (C) <1 (-) 14 (-) >0.05
rs9276114 chr6:32697197 HLA-DQA2 [-11922bp] C - 10 T vs. C - - <1 (-) 24 (-) >0.05
rs9276160 chr6:32698421 HLA-DQA2 [-10698bp] C - 11 T vs. C 0.3 (T) 0.167 (T) <1 (-) 12 (-) >0.05
rs28986374 chr6:32752199 HLA-DQB2 [+20888bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28893532 chr6:32747817 HLA-DQB2 [+16506bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs9276215 chr6:32700041 HLA-DQA2 [-9078bp] C - 11 T vs. G 0.308 (T) 0.158 (T) <1 (-) 11 (-) >0.05
rs9276133 chr6:32697768 HLA-DQA2 [-11351bp] C - 11 A vs. G 0.3 (A) 0.167 (A) <1 (-) 12 (-) >0.05
rs28893533 chr6:32747827 HLA-DQB2 [+16516bp] C - 12 T vs. G 0.083 (T) - >1 (-) 0 (-) >0.05
rs9276135 chr6:32697801 HLA-DQA2 [-11318bp] C - 11 A vs. G 0.3 (G) 0.167 (G) >1 (-) 11 (-) >0.05
rs9276151 chr6:32698276 HLA-DQA2 [-10843bp] C - 11 T vs. C 0.333 (T) 0.158 (T) <1 (-) 12 (-) >0.05
rs9276293 chr6:32702868 HLA-DQA2 [-6251bp] C - 11 C vs. G 0.3 (C) 0.15 (C) <1 (-) 9 (-) >0.05
rs9275716 chr6:32688302 HLA-DQA2 [-20817bp] C - 12 T vs. C 0.308 (T) 0.167 (T) <1 (-) 3 (-) >0.05
rs7451194 chr6:32735645 HLA-DQB2 [+4334bp] C - 12 T vs. C 0.25 (C) 0.45 (C) <1 (-) 3 (-) >0.05
rs9275754 chr6:32689146 HLA-DQA2 [-19973bp] C - 12 C vs. G 0.3 (C) 0.158 (C) <1 (-) 11 (-) >0.05
rs9276291 chr6:32702813 HLA-DQA2 [-6306bp] C - 11 T vs. C 0.3 (T) 0.15 (T) <1 (-) 9 (-) >0.05
rs9275717 chr6:32688343 HLA-DQA2 [-20776bp] C - 12 A vs. C 0.3 (A) 0.167 (A) <1 (-) 4 (-) >0.05
rs9276515 chr6:32720177 MIR3135B [+2421bp] C - 11 A vs. G 0.5 (G) 0.233 (G) <1 (-) 24 (-) >0.05
rs28986391 chr6:32754294 HLA-DQB2 [+22983bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs9276139 chr6:32697907 HLA-DQA2 [-11212bp] C - 11 T vs. C 0.317 (T) 0.167 (T) <1 (-) 10 (-) >0.05
rs7751842 chr6:32698960 HLA-DQA2 [-10159bp] C - 11 A vs. C 0.308 (C) 0.167 (C) >1 (-) 11 (-) >0.05
rs9275692 chr6:32687766 HLA-DQA2 [-21353bp] C - 10 A vs. T 0.15 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs72500555 chr6:32734862 HLA-DQB2 [+3551bp] C - 8 A vs. G - 0.025 (G) <1 (-) 0 (-) >0.05
rs2857209 chr6:32741918 HLA-DQB2 [+10607bp] C - 12 A vs. G 0.392 (A) 0.442 (A) >1 (-) 0 (-) >0.05
rs143683997 chr6:32738119 HLA-DQB2 [+6808bp] C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs6919798 chr6:32732890 HLA-DQB2 [+1579bp] C - 12 A vs. G 0.067 (G) - >1 (-) 0 (-) >0.05

Association studies for this region [+]