HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28986359 chr6:32751349 HLA-DQB2 [+20038bp] C - 12 C vs. G 0.092 (C) - >1 (-) 0 (-) >0.05
rs28986370 chr6:32751960 HLA-DQB2 [+20649bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs28986371 chr6:32752006 HLA-DQB2 [+20695bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs4403295 chr6:32710010 HLA-DQA2 C - 11 T vs. G 0.333 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs28986360 chr6:32751370 HLA-DQB2 [+20059bp] C - 12 A vs. C 0.092 (A) - >1 (-) 0 (-) >0.05
rs17429127 chr6:32751614 HLA-DQB2 [+20303bp] C - 12 C vs. G 0.092 (C) - >1 (-) 0 (-) >0.05
rs28986362 chr6:32751451 HLA-DQB2 [+20140bp] C - 12 C vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28986363 chr6:32751555 HLA-DQB2 [+20244bp] C - 12 A vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs9276623 chr6:32743640 HLA-DQB2 [+12329bp] C - 12 A vs. G 0.192 (A) - <1 (-) 0 (-) >0.05
rs28371293 chr6:32677099 HLA-DQA2 [-32020bp] C - 11 A vs. T 0.267 (A) 0.383 (A) <1 (-) 39 (-) >0.05
rs17212650 chr6:32674869 HLA-DQA2 [-34250bp] C - 12 T vs. C 0.267 (T) 0.4 (T) <1 (-) 35 (-) >0.05
rs2859055 chr6:32694688 HLA-DQA2 [-14431bp] C - 10 A vs. G 0.35 (A) 0.333 (G) >1 (-) 24 (-) >0.05
rs28986373 chr6:32752150 HLA-DQB2 [+20839bp] C - 12 A vs. C 0.092 (A) - >1 (-) 0 (-) >0.05
rs28986379 chr6:32752357 HLA-DQB2 [+21046bp] C - 12 T vs. G 0.092 (T) - >1 (-) 0 (-) >0.05
rs28986372 chr6:32752130 HLA-DQB2 [+20819bp] C - 12 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs9276161 chr6:32698439 HLA-DQA2 [-10680bp] C - 11 A vs. G 0.15 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs28986420 chr6:32757468 HLA-DOB [-23072bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs2105843 chr6:32779973 HLA-DOB [-567bp] C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs28986416 chr6:32755506 HLA-DQB2 [+24195bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs28371317 chr6:32678634 HLA-DQA2 [-30485bp] C - 12 T vs. C 0.242 (C) 0.383 (C) >1 (-) 34 (-) >0.05
rs2857126 chr6:32777140 HLA-DOB [-3400bp] C - 11 T vs. C 0.392 (C) 0.25 (C) >1 (-) 23 (-) >0.05
rs2859120 chr6:32697293 HLA-DQA2 [-11826bp] C - 10 T vs. G - - <1 (-) 24 (-) >0.05
rs13195319 chr6:32686266 HLA-DQA2 [-22853bp] C - 11 A vs. G 0.35 (A) 0.325 (G) >1 (-) 26 (-) >0.05
rs9275801 chr6:32690208 HLA-DQA2 [-18911bp] C - 11 T vs. C 0.3 (T) 0.15 (T) <1 (-) 9 (-) >0.05
rs9275800 chr6:32690197 HLA-DQA2 [-18922bp] C - 11 T vs. C 0.308 (T) 0.15 (T) <1 (-) 9 (-) >0.05
rs9276145 chr6:32698026 HLA-DQA2 [-11093bp] C - 11 A vs. C 0.15 (C) - >1 (-) 0 (-) >0.05
rs2859100 chr6:32699479 HLA-DQA2 [-9640bp] C - 11 C vs. G 0.358 (C) 0.325 (G) >1 (-) 26 (-) >0.05
rs73737377 chr6:32778361 HLA-DOB [-2179bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9276064 chr6:32696157 HLA-DQA2 [-12962bp] C - 10 A vs. C 0.308 (A) 0.175 (A) <1 (-) 19 (-) >0.05
rs28755383 chr6:32676393 HLA-DQA2 [-32726bp] C - 12 C vs. G 0.275 (G) 0.383 (G) >1 (-) 35 (-) >0.05
rs28755384 chr6:32676398 HLA-DQA2 [-32721bp] C - 12 T vs. C 0.275 (C) 0.383 (C) >1 (-) 35 (-) >0.05
rs9276042 chr6:32695626 HLA-DQA2 [-13493bp] C - 10 T vs. C 0.308 (T) 0.142 (T) <1 (-) 20 (-) >0.05
rs9276071 chr6:32696354 HLA-DQA2 [-12765bp] C - 10 C vs. G 0.3 (C) 0.158 (C) <1 (-) 20 (-) >0.05
rs9276119 chr6:32697262 HLA-DQA2 [-11857bp] C - 10 A vs. G - - <1 (-) 17 (-) >0.05
rs73737294 chr6:32776898 HLA-DOB [-3642bp] C - 12 A vs. G - 0.008 (G) <1 (-) 0 (-) >0.05
rs9275811 chr6:32690380 HLA-DQA2 [-18739bp] C - 11 A vs. C 0.308 (C) 0.158 (C) >1 (-) 11 (-) >0.05
rs9276148 chr6:32698099 HLA-DQA2 [-11020bp] C - 10 A vs. G 0.325 (G) 0.158 (G) >1 (-) 14 (-) >0.05
rs9275832 chr6:32690818 HLA-DQA2 [-18301bp] C - 11 T vs. C 0.317 (C) 0.175 (C) >1 (-) 14 (-) >0.05
rs9276244 chr6:32701221 HLA-DQA2 [-7898bp] C - 11 A vs. G - - >1 (-) 3 (-) >0.05
rs17206392 chr6:32675171 HLA-DQA2 [-33948bp] C - 12 T vs. C 0.267 (T) 0.383 (T) <1 (-) 35 (-) >0.05
rs9276062 chr6:32696039 HLA-DQA2 [-13080bp] C - 10 A vs. T 0.3 (T) 0.158 (T) >1 (-) 20 (-) >0.05
rs9276158 chr6:32698391 HLA-DQA2 [-10728bp] C - 11 T vs. C 0.15 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs9275739 chr6:32688857 HLA-DQA2 [-20262bp] C - 12 T vs. G 0.308 (G) 0.158 (G) >1 (-) 10 (-) >0.05
rs13195585 chr6:32686264 HLA-DQA2 [-22855bp] C - 11 A vs. G 0.35 (G) 0.325 (A) <1 (-) 26 (-) >0.05
rs2858892 chr6:32693242 HLA-DQA2 [-15877bp] C - 11 A vs. G 0.35 (G) 0.35 (A) <1 (-) 15 (-) >0.05
rs9275789 chr6:32689925 HLA-DQA2 [-19194bp] C - 11 A vs. G 0.358 (A) 0.158 (A) <1 (-) 13 (-) >0.05
rs9275827 chr6:32690725 HLA-DQA2 [-18394bp] C - 11 T vs. C 0.317 (T) 0.133 (T) <1 (-) 13 (-) >0.05
rs9276107 chr6:32697100 HLA-DQA2 [-12019bp] C - 10 A vs. G 0.3 (A) 0.175 (A) <1 (-) 19 (-) >0.05
rs9276108 chr6:32697109 HLA-DQA2 [-12010bp] C - 10 A vs. G 0.333 (A) 0.175 (A) <1 (-) 19 (-) >0.05
rs28893548 chr6:32750217 HLA-DQB2 [+18906bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05

Association studies for this region [+]