HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9501223 chr6:32776497 HLA-DOB [-4043bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9276068 chr6:32696239 HLA-DQA2 [-12880bp] C - 10 A vs. G 0.3 (A) 0.158 (A) <1 (-) 20 (-) >0.05
rs11759423 chr6:32730392 HLA-DQB2 C - 12 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs28755391 chr6:32678002 HLA-DQA2 [-31117bp] C - 12 T vs. C 0.25 (T) 0.383 (T) <1 (-) 34 (-) >0.05
rs28986335 chr6:32748137 HLA-DQB2 [+16826bp] C - 12 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs7751699 chr6:32698899 HLA-DQA2 [-10220bp] C - 11 A vs. G 0.3 (G) 0.142 (G) >1 (-) 24 (-) >0.05
rs9275826 chr6:32690713 HLA-DQA2 [-18406bp] C - 11 A vs. G 0.308 (A) 0.142 (A) <1 (-) 13 (-) >0.05
rs9276061 chr6:32695975 HLA-DQA2 [-13144bp] C - 10 T vs. G 0.308 (T) 0.158 (T) <1 (-) 20 (-) >0.05
rs17212818 chr6:32675449 HLA-DQA2 [-33670bp] C - 12 T vs. C 0.25 (C) 0.383 (C) >1 (-) 36 (-) >0.05
rs2859064 chr6:32692812 HLA-DQA2 [-16307bp] C - 11 T vs. C 0.35 (C) 0.325 (T) <1 (-) 13 (-) >0.05
rs9276058 chr6:32695904 HLA-DQA2 [-13215bp] C - 10 A vs. C 0.3 (A) 0.158 (A) <1 (-) 20 (-) >0.05
rs17615293 chr6:32679489 HLA-DQA2 [-29630bp] C - 12 A vs. C 0.267 (C) 0.367 (C) >1 (-) 34 (-) >0.05
rs28371315 chr6:32678388 HLA-DQA2 [-30731bp] C - 12 T vs. C 0.267 (C) 0.392 (C) >1 (-) 34 (-) >0.05
rs9276407 chr6:32710307 HLA-DQA2 C - 11 A vs. G 0.15 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs2894294 chr6:32760965 HLA-DOB [-19575bp] C - 12 A vs. G 0.392 (G) 0.258 (G) >1 (-) 13 (-) >0.05
rs17206343 chr6:32675032 HLA-DQA2 [-34087bp] C - 12 T vs. C 0.25 (T) 0.383 (T) <1 (-) 36 (-) >0.05
rs28371316 chr6:32678502 HLA-DQA2 [-30617bp] C - 12 A vs. G 0.258 (G) 0.375 (G) >1 (-) 34 (-) >0.05
rs9276056 chr6:32695828 HLA-DQA2 [-13291bp] C - 10 T vs. G 0.325 (T) 0.158 (T) <1 (-) 20 (-) >0.05
rs9276445 chr6:32715414 HLA-DQA2 [+422bp] C - 10 A vs. G - - >1 (-) 25 (-) >0.05
rs9275825 chr6:32690671 HLA-DQA2 [-18448bp] C - 11 T vs. C 0.342 (C) 0.15 (C) >1 (-) 12 (-) >0.05
rs2894297 chr6:32779352 HLA-DOB [-1188bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs2227126 chr6:32715773 HLA-DQA2 [+781bp] C - 11 T vs. C 0.425 (T) 0.233 (C) >1 (-) 29 (-) >0.05
rs2097294 chr6:32779583 HLA-DOB [-957bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2097293 chr6:32779642 HLA-DOB [-898bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs28986334 chr6:32748021 HLA-DQB2 [+16710bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs2395267 chr6:32779292 HLA-DOB [-1248bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9276037 chr6:32695434 HLA-DQA2 [-13685bp] C - 10 A vs. G 0.317 (A) 0.158 (A) <1 (-) 23 (-) >0.05
rs9276392 chr6:32708338 HLA-DQA2 [-781bp] C - 11 T vs. C - - <1 (-) 20 (-) >0.05
rs2894296 chr6:32779276 HLA-DOB [-1264bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs3208181 chr6:32713030 HLA-DQA2 C - 10 T vs. C 0.342 (C) 0.283 (T) <1 (-) 27 (-) >0.05
rs9276036 chr6:32695432 HLA-DQA2 [-13687bp] C - 10 T vs. C 0.308 (C) 0.158 (C) >1 (-) 23 (-) >0.05
rs9275764 chr6:32689289 HLA-DQA2 [-19830bp] C - 11 T vs. C 0.158 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs9275824 chr6:32690664 HLA-DQA2 [-18455bp] C - 11 A vs. G 0.342 (A) 0.15 (A) <1 (-) 12 (-) >0.05
rs2859059 chr6:32693844 HLA-DQA2 [-15275bp] C - 4 A vs. G 0.225 (A) 0.475 (A) <1 (-) 63 (-) >0.05
rs28986412 chr6:32755327 HLA-DQB2 [+24016bp] C - 12 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs28986413 chr6:32755375 HLA-DQB2 [+24064bp] C - 12 T vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28772312 chr6:32686596 HLA-DQA2 [-22523bp] C - 12 A vs. G - - <1 (-) 14 (-) >0.05
rs28371305 chr6:32677690 HLA-DQA2 [-31429bp] C - 12 T vs. G 0.275 (G) 0.392 (G) >1 (-) 35 (-) >0.05
rs28371323 chr6:32679059 HLA-DQA2 [-30060bp] C - 12 A vs. T 0.258 (A) 0.342 (A) <1 (-) 34 (-) >0.05
rs13217231 chr6:32748690 HLA-DQB2 [+17379bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs28986343 chr6:32748953 HLA-DQB2 [+17642bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs28986348 chr6:32749122 HLA-DQB2 [+17811bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs28986349 chr6:32749140 HLA-DQB2 [+17829bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs9276027 chr6:32695317 HLA-DQA2 [-13802bp] C - 10 T vs. C 0.3 (C) 0.175 (C) >1 (-) 21 (-) >0.05
rs9276067 chr6:32696238 HLA-DQA2 [-12881bp] C - 10 T vs. C 0.3 (C) 0.158 (C) >1 (-) 21 (-) >0.05
rs9275901 chr6:32692216 HLA-DQA2 [-16903bp] C - 11 T vs. C 0.3 (T) 0.158 (T) <1 (-) 14 (-) >0.05
rs9276038 chr6:32695437 HLA-DQA2 [-13682bp] C - 10 T vs. C 0.317 (T) 0.158 (T) <1 (-) 22 (-) >0.05
rs7753557 chr6:32727680 HLA-DQB2 C - 12 A vs. T 0.492 (A) 0.233 (A) >1 (-) 31 (-) >0.05
rs9276026 chr6:32695294 HLA-DQA2 [-13825bp] C - 10 T vs. C 0.3 (T) 0.175 (T) <1 (-) 22 (-) >0.05
rs17212657 chr6:32674903 HLA-DQA2 [-34216bp] C - 12 T vs. C 0.267 (C) 0.408 (C) >1 (-) 36 (-) >0.05

Association studies for this region [+]