HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
Meta_image?name=rs9275503

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276346 chr6:32706069 HLA-DQA2 [-3050bp] C - 11 C vs. G 0.15 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs2621354 chr6:32771354 HLA-DOB [-9186bp] C - 12 T vs. G 0.392 (T) 0.25 (T) <1 (-) 16 (-) >0.05
rs2395264 chr6:32735295 HLA-DQB2 [+3984bp] C - 12 T vs. C 0.425 (T) 0.242 (C) <1 (-) 27 (-) >0.05
rs2621352 chr6:32771887 HLA-DOB [-8653bp] C - 12 T vs. C - - >1 (-) 16 (-) >0.05
rs2857144 chr6:32771610 HLA-DOB [-8930bp] C - 12 A vs. G 0.392 (A) 0.25 (A) <1 (-) 16 (-) >0.05
rs9276012 chr6:32694710 HLA-DQA2 [-14409bp] C - 10 A vs. G 0.308 (G) 0.158 (G) >1 (-) 25 (-) >0.05
rs9276320 chr6:32705014 HLA-DQA2 [-4105bp] C - 11 T vs. C 0.15 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs1573648 chr6:32731439 HLA-DQB2 [+128bp] C - 12 A vs. G 0.417 (A) 0.233 (G) <1 (-) 28 (-) >0.05
rs2621351 chr6:32772004 HLA-DOB [-8536bp] C - 12 T vs. G 0.367 (G) 0.25 (G) >1 (-) 16 (-) >0.05
rs1023449 chr6:32727905 HLA-DQB2 C - 12 A vs. C 0.492 (A) 0.233 (A) >1 (-) 29 (-) >0.05
rs9276359 chr6:32706770 HLA-DQA2 [-2349bp] C - 11 T vs. C 0.15 (T) - <1 (-) 0 (-) >0.05
rs2859087 chr6:32701338 HLA-DQA2 [-7781bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs9276347 chr6:32706208 HLA-DQA2 [-2911bp] C - 11 A vs. G 0.15 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs9276586 chr6:32732937 HLA-DQB2 [+1626bp] C - 12 A vs. G 0.425 (A) 0.242 (G) <1 (-) 28 (-) >0.05
rs9275870 chr6:32691549 HLA-DQA2 [-17570bp] C - 11 A vs. G - - <1 (-) 9 (-) >0.05
rs9275864 chr6:32691504 HLA-DQA2 [-17615bp] C - 11 T vs. C - - <1 (-) 11 (-) >0.05
rs2157324 chr6:32705828 HLA-DQA2 [-3291bp] C - 11 C vs. G 0.158 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs9275874 chr6:32691568 HLA-DQA2 [-17551bp] C - 11 T vs. C - - >1 (-) 11 (-) >0.05
rs9276328 chr6:32705419 HLA-DQA2 [-3700bp] C - 11 T vs. C 0.292 (T) - <1 (-) 20 (-) >0.05
rs9276201 chr6:32699662 HLA-DQA2 [-9457bp] C - 11 T vs. G 0.2 (G) - <1 (-) 0 (-) >0.05
rs9275829 chr6:32690784 HLA-DQA2 [-18335bp] C - 11 T vs. C 0.2 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs2051600 chr6:32709309 HLA-DQA2 C - 11 A vs. G - - <1 (-) 16 (-) >0.05
rs9276014 chr6:32694738 HLA-DQA2 [-14381bp] C - 10 T vs. C 0.3 (T) 0.158 (T) <1 (-) 20 (-) >0.05
rs9276190 chr6:32699350 HLA-DQA2 [-9769bp] C - 11 T vs. C 0.2 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs2857133 chr6:32776120 HLA-DOB [-4420bp] C - 12 A vs. G 0.392 (A) 0.258 (A) <1 (-) 16 (-) >0.05
rs9276253 chr6:32701467 HLA-DQA2 [-7652bp] C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs2395251 chr6:32707569 HLA-DQA2 [-1550bp] C - 11 C vs. G 0.15 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs9276598 chr6:32733987 HLA-DQB2 [+2676bp] C - 12 A vs. G 0.425 (A) 0.333 (G) <1 (-) 30 (-) >0.05
rs9276403 chr6:32709738 HLA-DQA2 C - 11 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs5019296 chr6:32733446 HLA-DQB2 [+2135bp] C - 12 T vs. C 0.425 (C) 0.242 (T) >1 (-) 28 (-) >0.05
rs9276342 chr6:32705797 HLA-DQA2 [-3322bp] C - 11 A vs. C - - <1 (-) 7 (-) >0.05
rs9275858 chr6:32691345 HLA-DQA2 [-17774bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs1023448 chr6:32728191 HLA-DQB2 C - 12 T vs. C 0.492 (C) 0.233 (C) <1 (-) 28 (-) >0.05
rs2857122 chr6:32777472 HLA-DOB [-3068bp] C - 12 A vs. G 0.4 (G) 0.25 (G) >1 (-) 16 (-) >0.05
rs9276055 chr6:32695818 HLA-DQA2 [-13301bp] C - 11 T vs. C 0.208 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs9276054 chr6:32695798 HLA-DQA2 [-13321bp] C - 11 T vs. C 0.167 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs9276376 chr6:32707614 HLA-DQA2 [-1505bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs9276402 chr6:32709586 HLA-DQA2 C - 11 A vs. G 0.15 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs9276366 chr6:32707071 HLA-DQA2 [-2048bp] C - 11 A vs. G 0.15 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs1573647 chr6:32731615 HLA-DQB2 [+304bp] C - 12 T vs. C 0.425 (T) 0.233 (C) <1 (-) 30 (-) >0.05
rs9276367 chr6:32707124 HLA-DQA2 [-1995bp] C - 11 A vs. T 0.15 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs9276383 chr6:32707884 HLA-DQA2 [-1235bp] C - 11 A vs. G 0.15 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs9276398 chr6:32708798 HLA-DQA2 [-321bp] C - 11 T vs. C 0.15 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs146834055 chr6:32769173 HLA-DOB [-11367bp] C - 11 A vs. G - - >1 (-) 21 (-) >0.05
rs2051597 chr6:32709370 HLA-DQA2 C - 11 T vs. C 0.292 (T) 0.133 (T) <1 (-) 16 (-) >0.05
rs2859074 chr6:32702800 HLA-DQA2 [-6319bp] C - 11 T vs. G 0.483 (T) 0.225 (G) >1 (-) 10 (-) >0.05
rs10484564 chr6:32752049 HLA-DQB2 [+20738bp] C - 12 C vs. G 0.042 (C) - <1 (-) 54 (-) >0.05
rs151258646 chr6:32762141 HLA-DOB [-18399bp] C - 11 T vs. C - - >1 (-) 22 (-) >0.05
rs9276385 chr6:32707893 HLA-DQA2 [-1226bp] C - 11 A vs. C 0.15 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs6918223 chr6:32722532 HLA-DQB2 [-1343bp] C - 12 A vs. C 0.425 (C) 0.233 (A) <1 (-) 26 (-) >0.05

Association studies for this region [+]