HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276399 chr6:32708890 HLA-DQA2 [-229bp] C - 11 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs9276717 chr6:32761398 HLA-DOB [-19142bp] C - 12 A vs. C 0.092 (A) - >1 (-) 0 (-) >0.05
rs28371308 chr6:32678162 HLA-DQA2 [-30957bp] C - 12 A vs. T 0.275 (A) 0.383 (A) <1 (-) 32 (-) >0.05
rs9275949 chr6:32693124 HLA-DQA2 [-15995bp] C - 11 A vs. G 0.3 (G) 0.125 (G) >1 (-) 9 (-) >0.05
rs9276084 chr6:32696666 HLA-DQA2 [-12453bp] C - 11 A vs. C 0.15 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs7383433 chr6:32778531 HLA-DOB [-2009bp] C - 12 A vs. G 0.392 (A) 0.25 (A) <1 (-) 16 (-) >0.05
rs9276013 chr6:32694724 HLA-DQA2 [-14395bp] C - 10 A vs. T 0.333 (T) 0.158 (T) >1 (-) 20 (-) >0.05
rs2621375 chr6:32763974 HLA-DOB [-16566bp] C - 12 T vs. C - - <1 (-) 16 (-) >0.05
rs9276800 chr6:32778709 HLA-DOB [-1831bp] C - 6 A vs. G - - >1 (-) 46 (-) >0.05
rs9275868 chr6:32691528 HLA-DQA2 [-17591bp] C - 11 A vs. G 0.375 (G) 0.158 (G) >1 (-) 7 (-) >0.05
rs9275953 chr6:32693254 HLA-DQA2 [-15865bp] C - 11 T vs. C 0.317 (C) 0.175 (C) >1 (-) 13 (-) >0.05
rs5001630 chr6:32723129 HLA-DQB2 [-746bp] C - 12 A vs. G 0.425 (A) 0.242 (G) >1 (-) 26 (-) >0.05
rs17428132 chr6:32687119 HLA-DQA2 [-22000bp] C - 12 T vs. C - - >1 (-) 16 (-) >0.05
rs2857136 chr6:32775686 HLA-DOB [-4854bp] C - 12 A vs. G 0.392 (A) 0.25 (A) <1 (-) 16 (-) >0.05
rs9276456 chr6:32715943 HLA-DQA2 [+951bp] C - 9 A vs. G 0.2 (G) - >1 (-) 0 (-) >0.05
rs9276716 chr6:32761231 HLA-DOB [-19309bp] C - 12 T vs. C 0.083 (T) - >1 (-) 0 (-) >0.05
rs2857130 chr6:32776414 HLA-DOB [-4126bp] C - 12 A vs. T 0.392 (T) 0.25 (T) >1 (-) 16 (-) >0.05
rs9276595 chr6:32733931 HLA-DQB2 [+2620bp] C - 12 A vs. G 0.417 (A) 0.242 (G) <1 (-) 28 (-) >0.05
rs2857129 chr6:32776623 HLA-DOB [-3917bp] C - 12 A vs. T 0.392 (A) 0.25 (A) <1 (-) 16 (-) >0.05
rs2857128 chr6:32776832 HLA-DOB [-3708bp] C - 12 A vs. G 0.392 (A) 0.242 (A) <1 (-) 16 (-) >0.05
rs6929856 chr6:32777198 HLA-DOB [-3342bp] C - 12 A vs. C 0.4 (C) 0.25 (C) >1 (-) 16 (-) >0.05
rs6929867 chr6:32777216 HLA-DOB [-3324bp] C - 12 T vs. C 0.4 (C) 0.242 (C) >1 (-) 15 (-) >0.05
rs2621336 chr6:32776976 HLA-DOB [-3564bp] C - 12 T vs. C 0.392 (C) 0.25 (C) >1 (-) 16 (-) >0.05
rs2857127 chr6:32776854 HLA-DOB [-3686bp] C - 12 A vs. G 0.392 (A) 0.242 (A) <1 (-) 16 (-) >0.05
rs9275991 chr6:32694242 HLA-DQA2 [-14877bp] C - 10 A vs. G 0.308 (G) 0.167 (G) >1 (-) 19 (-) >0.05
rs2199870 chr6:32773172 HLA-DOB [-7368bp] C - 12 T vs. C 0.392 (C) 0.258 (C) >1 (-) 17 (-) >0.05
rs2857124 chr6:32777305 HLA-DOB [-3235bp] C - 12 A vs. T 0.433 (T) 0.25 (T) >1 (-) 16 (-) >0.05
rs5019295 chr6:32733481 HLA-DQB2 [+2170bp] C - 12 A vs. G 0.425 (A) 0.333 (G) <1 (-) 24 (-) >0.05
rs9276088 chr6:32696696 HLA-DQA2 [-12423bp] C - 11 A vs. C 0.142 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs2157083 chr6:32760655 HLA-DOB [-19885bp] C - 12 T vs. C - - >1 (-) 11 (-) >0.05
rs9276343 chr6:32705807 HLA-DQA2 [-3312bp] C - 11 T vs. C - - <1 (-) 7 (-) >0.05
rs3213483 chr6:32726577 HLA-DQB2 C - 11 T vs. G 0.5 (G) 0.275 (G) <1 (-) 35 (-) >0.05
rs9276009 chr6:32694641 HLA-DQA2 [-14478bp] C - 10 T vs. C 0.3 (T) 0.167 (T) <1 (-) 19 (-) >0.05
rs9275943 chr6:32693039 HLA-DQA2 [-16080bp] C - 11 A vs. G - - >1 (-) 7 (-) >0.05
rs116626221 chr6:32770355 HLA-DOB [-10185bp] C - 12 T vs. C 0.05 (T) - <1 (-) 48 (-) >0.05
rs60798676 chr6:32771973 HLA-DOB [-8567bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs28986419 chr6:32755633 HLA-DQB2 [+24322bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs9276021 chr6:32695212 HLA-DQA2 [-13907bp] C - 11 T vs. C 0.2 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs9275908 chr6:32692337 HLA-DQA2 [-16782bp] C - 11 A vs. T 0.308 (A) 0.167 (A) <1 (-) 11 (-) >0.05
rs9276008 chr6:32694633 HLA-DQA2 [-14486bp] C - 10 T vs. C 0.308 (C) 0.167 (C) >1 (-) 19 (-) >0.05
rs9275965 chr6:32693482 HLA-DQA2 [-15637bp] C - 11 A vs. C 0.192 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs1383265 chr6:32739888 HLA-DQB2 [+8577bp] C - 12 T vs. C 0.192 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs9469224 chr6:32687421 HLA-DQA2 [-21698bp] C - 12 T vs. C 0.35 (C) 0.342 (T) <1 (-) 16 (-) >0.05
rs2857114 chr6:32779996 HLA-DOB [-544bp] C - 12 A vs. G 0.392 (G) 0.258 (G) >1 (-) 19 (-) >0.05
rs9275970 chr6:32693615 HLA-DQA2 [-15504bp] C - 11 T vs. C 0.2 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs2859075 chr6:32702798 HLA-DQA2 [-6321bp] C - 11 T vs. G 0.208 (G) 0.075 (G) <1 (-) 0 (-) >0.05
rs9276339 chr6:32705700 HLA-DQA2 [-3419bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs28986341 chr6:32748934 HLA-DQB2 [+17623bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs5001629 chr6:32723136 HLA-DQB2 [-739bp] C - 12 A vs. G 0.417 (A) 0.242 (G) >1 (-) 26 (-) >0.05
rs9276718 chr6:32761674 HLA-DOB [-18866bp] C - 12 C vs. G 0.092 (C) - >1 (-) 0 (-) >0.05

Association studies for this region [+]