HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28394125 chr6:32686457 HLA-DQA2 [-22662bp] C - 6 A vs. C 0.008 (A) - <1 (-) 10 (-) >0.05
rs149005483 chr6:32674166 HLA-DQA2 [-34953bp] C - 10 A vs. T - - <1 (-) 0 (-) >0.05
rs116171556 chr6:32720024 MIR3135B [+2268bp] C - 7 A vs. T - - >1 (-) 10 (-) >0.05
rs9275596 chr6:32681631 HLA-DQA2 [-27488bp] C - 12 T vs. C 0.367 (C) 0.167 (C) <1 (-) 28 (-) >0.05
rs71565344 chr6:32673965 HLA-DQA2 [-35154bp] C - 11 A vs. G - - >1 (-) 71 (-) >0.05
rs115911154 chr6:32674194 HLA-DQA2 [-34925bp] C - 10 A vs. G - 0.067 (G) <1 (-) 0 (-) >0.05
rs117296796 chr6:32674192 HLA-DQA2 [-34927bp] C - 10 A vs. G - 0.075 (G) <1 (-) 0 (-) >0.05
rs143613923 chr6:32764117 HLA-DOB [-16423bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs56144236 chr6:32720219 MIR3135B [+2463bp] C - 4 A vs. G - 0.075 (A) >1 (-) 0 (-) >0.05
chr6:32731345 chr6:32731345 HLA-DQB2 [+34bp] C - 7 C vs. G - - <1 (-) 0 (-) >0.05
chr6:32731360 chr6:32731360 HLA-DQB2 [+49bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs201992526 chr6:32731192 HLA-DQB2 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs2621344 chr6:32773278 HLA-DOB [-7262bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs145281025 chr6:32674252 HLA-DQA2 [-34867bp] C - 11 A vs. G - - >1 (-) 72 (-) >0.05
rs7764819 chr6:32680576 HLA-DQA2 [-28543bp] C - 11 T vs. G 0.1 (G) 0.158 (G) >1 (-) 0 (-) >0.05
rs7765379 chr6:32680928 HLA-DQA2 [-28191bp] C - 11 T vs. G 0.1 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs115756946 chr6:32753791 HLA-DQB2 [+22480bp] C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs139464972 chr6:32750596 HLA-DQB2 [+19285bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs1158784 chr6:32758761 HLA-DOB [-21779bp] C - 12 A vs. T 0.258 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs112057165 chr6:32677822 HLA-DQA2 [-31297bp] C - 3 T vs. C - 0.017 (C) >1 (-) 19 (-) >0.05
rs17840170 chr6:32705338 HLA-DQA2 [-3781bp] C - 4 T vs. C - 0.033 (C) >1 (-) 45 (-) >0.05
rs73734654 chr6:32692659 HLA-DQA2 [-16460bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs60829415 chr6:32676697 HLA-DQA2 [-32422bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs2857145 chr6:32771560 HLA-DOB [-8980bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs115276762 chr6:32674178 HLA-DQA2 [-34941bp] C - 10 T vs. C - 0.092 (T) >1 (-) 0 (-) >0.05
rs2621370 chr6:32768222 HLA-DOB [-12318bp] C - 12 T vs. G 0.175 (T) - >1 (-) 5 (-) >0.05
rs2857147 chr6:32770180 HLA-DOB [-10360bp] C - 12 T vs. C 0.342 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs9501663 chr6:32768474 HLA-DOB [-12066bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2621355 chr6:32771341 HLA-DOB [-9199bp] C - 12 A vs. G 0.25 (A) 0.317 (A) >1 (-) 0 (-) >0.05
rs2621365 chr6:32769140 HLA-DOB [-11400bp] C - 12 T vs. C 0.35 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs199895302 chr6:32728965 HLA-DQB2 C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs9276699 chr6:32756567 HLA-DOB [-23973bp] C - 12 A vs. T 0.308 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs2199873 chr6:32770125 HLA-DOB [-10415bp] C - 12 A vs. G 0.342 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs9501664 chr6:32768488 HLA-DOB [-12052bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs17212937 chr6:32681339 HLA-DQA2 [-27780bp] C - 11 T vs. C 0.1 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs2621367 chr6:32768721 HLA-DOB [-11819bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs11961213 chr6:32767249 HLA-DOB [-13291bp] C - 4 A vs. G - 0.058 (A) <1 (-) 0 (-) >0.05
rs2621360 chr6:32769575 HLA-DOB [-10965bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs719654 chr6:32752139 HLA-DQB2 [+20828bp] C - 12 A vs. G 0.225 (A) 0.3 (A) >1 (-) 1 (-) >0.05
rs2621368 chr6:32768333 HLA-DOB [-12207bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2219893 chr6:32769663 HLA-DOB [-10877bp] C - 12 T vs. C 0.342 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs112357706 chr6:32685344 HLA-DQA2 [-23775bp] C - 7 T vs. C 0.008 (C) - >1 (-) 26 (-) >0.05
rs2621356 chr6:32771033 HLA-DOB [-9507bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs1480381 chr6:32775235 HLA-DOB [-5305bp] C - 12 A vs. T 0.342 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs2621372 chr6:32765302 HLA-DOB [-15238bp] C - 12 A vs. C 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2621364 chr6:32769204 HLA-DOB [-11336bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2199874 chr6:32769926 HLA-DOB [-10614bp] C - 12 A vs. G 0.342 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs2621363 chr6:32769389 HLA-DOB [-11151bp] C - 12 T vs. G 0.342 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs2857131 chr6:32776258 HLA-DOB [-4282bp] C - 12 A vs. T 0.333 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs2621358 chr6:32770808 HLA-DOB [-9732bp] C - 12 T vs. C 0.35 (T) 0.367 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]