HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs139113058 chr6:32747601 HLA-DQB2 [+16290bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs113532053 chr6:32766158 HLA-DOB [-14382bp] C - 12 C vs. G 0.083 (C) - >1 (-) 0 (-) >0.05
rs149109754 chr6:32748285 HLA-DQB2 [+16974bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs28577241 chr6:32709352 HLA-DQA2 C - 3 A vs. G - 0.042 (G) >1 (-) 62 (-) >0.05
rs116456836 chr6:32767983 HLA-DOB [-12557bp] C - 12 A vs. G 0.092 (A) 0.225 (A) >1 (-) 37 (-) >0.05
rs75108103 chr6:32708960 HLA-DQA2 [-159bp] C - 4 T vs. C 0.008 (T) 0.033 (T) <1 (-) 46 (-) >0.05
rs113156102 chr6:32708831 HLA-DQA2 [-288bp] C - 4 T vs. C 0.008 (T) 0.017 (T) <1 (-) 46 (-) >0.05
rs112671150 chr6:32708882 HLA-DQA2 [-237bp] C - 4 A vs. G - 0.033 (A) <1 (-) 46 (-) >0.05
rs73400718 chr6:32709075 HLA-DQA2 [-44bp] C - 4 T vs. G - 0.025 (G) >1 (-) 46 (-) >0.05
rs4947353 chr6:32777678 HLA-DOB [-2862bp] C - 12 A vs. G 0.092 (A) 0.192 (A) >1 (-) 36 (-) >0.05
rs17219295 chr6:32680697 HLA-DQA2 [-28422bp] C - 11 T vs. C 0.183 (T) 0.367 (T) >1 (-) 28 (-) >0.05
rs17219288 chr6:32680696 HLA-DQA2 [-28423bp] C - 11 A vs. G 0.183 (A) 0.367 (A) >1 (-) 28 (-) >0.05
rs3129722 chr6:32676343 HLA-DQA2 [-32776bp] C - 8 A vs. C 0.033 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs3129732 chr6:32685240 HLA-DQA2 [-23879bp] C - 10 C vs. G 0.1 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs9276485 chr6:32718479 MIR3135B [+723bp] C - 5 T vs. C 0.083 (T) - <1 (-) 18 (-) >0.05
rs9276486 chr6:32718481 MIR3135B [+725bp] C - 5 C vs. G 0.083 (C) - <1 (-) 18 (-) >0.05
rs61318116 chr6:32770493 HLA-DOB [-10047bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs3135191 chr6:32678896 HLA-DQA2 [-30223bp] C - 8 A vs. C 0.033 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs9275505 chr6:32674058 HLA-DQA2 [-35061bp] C - 11 A vs. G 0.308 (G) 0.158 (G) >1 (-) 70 (-) >0.05
rs2621340 chr6:32775480 HLA-DOB [-5060bp] C - 12 T vs. C 0.342 (C) 0.367 (C) <1 (-) 4 (-) >0.05
rs113556552 chr6:32678064 HLA-DQA2 [-31055bp] C - 4 T vs. C - 0.033 (T) >1 (-) 13 (-) >0.05
chr6:32745721 chr6:32745721 HLA-DQB2 [+14410bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs9276409 chr6:32710377 HLA-DQA2 C - 10 T vs. C 0.383 (T) 0.217 (T) <1 (-) 17 (-) >0.05
rs9275587 chr6:32680379 HLA-DQA2 [-28740bp] C - 12 T vs. C 0.5 (T) 0.392 (T) >1 (-) 25 (-) >0.05
rs3129727 chr6:32679690 HLA-DQA2 [-29429bp] C - 8 T vs. C 0.033 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs9276031 chr6:32695361 HLA-DQA2 [-13758bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs3129728 chr6:32680149 HLA-DQA2 [-28970bp] C - 8 A vs. G 0.033 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs9276785 chr6:32776292 HLA-DOB [-4248bp] C - 12 A vs. G 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs3129729 chr6:32680277 HLA-DQA2 [-28842bp] C - 8 A vs. C 0.025 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs9404997 chr6:32680288 HLA-DQA2 [-28831bp] C - 11 A vs. G 0.183 (A) 0.367 (A) >1 (-) 36 (-) >0.05
rs9391745 chr6:32680283 HLA-DQA2 [-28836bp] C - 11 A vs. G 0.183 (G) 0.367 (G) <1 (-) 36 (-) >0.05
rs2647088 chr6:32681518 HLA-DQA2 [-27601bp] C - 11 A vs. G 0.183 (G) 0.367 (G) <1 (-) 33 (-) >0.05
rs6935723 chr6:32681669 HLA-DQA2 [-27450bp] C - 11 T vs. C 0.175 (C) 0.367 (C) <1 (-) 33 (-) >0.05
rs4947352 chr6:32777335 HLA-DOB [-3205bp] C - 12 A vs. G 0.092 (G) 0.175 (G) <1 (-) 38 (-) >0.05
rs6912414 chr6:32774465 HLA-DOB [-6075bp] C - 12 A vs. G 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs62396669 chr6:32748461 HLA-DQB2 [+17150bp] C - 12 C vs. G 0.083 (C) 0.225 (C) >1 (-) 36 (-) >0.05
rs6935578 chr6:32683552 HLA-DQA2 [-25567bp] C - 4 A vs. G 0.008 (G) - >1 (-) 29 (-) >0.05
rs118116221 chr6:32740782 HLA-DQB2 [+9471bp] C - 12 T vs. G - 0.058 (T) <1 (-) 0 (-) >0.05
rs6899878 chr6:32770530 HLA-DOB [-10010bp] C - 12 A vs. T 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs7382649 chr6:32776087 HLA-DOB [-4453bp] C - 12 T vs. C 0.267 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs9276609 chr6:32741487 HLA-DQB2 [+10176bp] C - 12 C vs. G 0.283 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs9404996 chr6:32680173 HLA-DQA2 [-28946bp] C - 11 A vs. G 0.183 (A) 0.342 (A) >1 (-) 31 (-) >0.05
rs9391743 chr6:32680172 HLA-DQA2 [-28947bp] C - 11 T vs. C 0.167 (C) 0.342 (C) <1 (-) 31 (-) >0.05
rs2647089 chr6:32681568 HLA-DQA2 [-27551bp] C - 11 T vs. C 0.183 (C) 0.367 (C) <1 (-) 33 (-) >0.05
rs6457678 chr6:32768378 HLA-DOB [-12162bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs17219918 chr6:32734536 HLA-DQB2 [+3225bp] C - 11 A vs. G 0.075 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs6457677 chr6:32766172 HLA-DOB [-14368bp] C - 12 A vs. T 0.258 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs6932969 chr6:32765671 HLA-DOB [-14869bp] C - 11 C vs. G 0.258 (G) 0.383 (G) >1 (-) 4 (-) >0.05
rs9276732 chr6:32765905 HLA-DOB [-14635bp] C - 11 A vs. T 0.267 (A) 0.383 (A) <1 (-) 4 (-) >0.05
rs7382714 chr6:32767496 HLA-DOB [-13044bp] C - 12 T vs. C 0.267 (C) 0.383 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]