HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7754768 chr6:32420179 HLA-DRA [+7356bp] C - 12 T vs. C 0.35 (C) 0.45 (C) <1 (-) 34 (-) <0.05
rs5007260 chr6:32379047 BTNL2 [+4142bp] C - 12 A vs. G 0.442 (G) 0.317 (G) <1 (-) 57 (-) <0.05
rs5007261 chr6:32379031 BTNL2 [+4126bp] C - 12 A vs. G 0.433 (G) 0.325 (G) <1 (-) 57 (-) <0.05
rs5007262 chr6:32379011 BTNL2 [+4106bp] C - 12 A vs. G 0.433 (A) 0.317 (A) >1 (-) 57 (-) <0.05
rs5007263 chr6:32378982 BTNL2 [+4077bp] C - 12 A vs. G 0.433 (A) 0.317 (A) >1 (-) 57 (-) <0.05
rs147132031 chr6:32435498 HLA-DRA [+22675bp] C - 3 A vs. G - - <1 (-) 1 (-) <0.05
rs5007264 chr6:32378877 BTNL2 [+3972bp] C - 12 T vs. C 0.433 (C) 0.325 (C) <1 (-) 61 (-) <0.05
rs5007265 chr6:32378866 BTNL2 [+3961bp] C - 12 T vs. G 0.433 (T) 0.317 (T) >1 (-) 61 (-) <0.05
rs9268519 chr6:32380826 BTNL2 [+5921bp] C - 12 A vs. G 0.433 (G) 0.325 (G) <1 (-) 56 (-) <0.05
rs2294883 chr6:32367451 BTNL2 C - 12 A vs. T 0.192 (A) 0.367 (A) >1 (-) 55 (-) <0.05
rs2294881 chr6:32367604 BTNL2 C - 12 T vs. C 0.192 (C) 0.367 (C) <1 (-) 54 (-) <0.05
rs3129962 chr6:32379383 BTNL2 [+4478bp] C - 12 C vs. G 0.225 (C) 0.183 (C) >1 (-) 49 (-) <0.05
rs9268765 chr6:32418579 HLA-DRA [+5756bp] C - 12 A vs. C 0.35 (A) 0.425 (A) >1 (-) 39 (-) <0.05
rs7743415 chr6:32425135 HLA-DRA [+12312bp] C - 12 T vs. C 0.358 (C) 0.425 (C) <1 (-) 37 (-) <0.05
rs9268815 chr6:32424677 HLA-DRA [+11854bp] C - 12 A vs. T 0.358 (A) 0.425 (A) >1 (-) 37 (-) <0.05
rs3135365 chr6:32389255 BTNL2 [+14350bp] C - 12 A vs. C 0.267 (C) 0.158 (C) <1 (-) 51 (-) <0.05
rs4935352 chr6:32369886 BTNL2 C - 12 A vs. G 0.192 (G) 0.242 (G) <1 (-) 55 (-) <0.05
rs62404560 chr6:32365896 BTNL2 C - 12 A vs. G 0.192 (G) 0.35 (G) <1 (-) 54 (-) <0.05
rs7755283 chr6:32420512 HLA-DRA [+7689bp] C - 12 T vs. C - - <1 (-) 6 (-) <0.05
rs2294884 chr6:32367259 BTNL2 C - 12 T vs. G 0.192 (G) 0.217 (G) <1 (-) 55 (-) <0.05
rs3817965 chr6:32367927 BTNL2 C - 12 A vs. G 0.183 (G) 0.367 (G) <1 (-) 59 (-) <0.05
rs1547422 chr6:32427099 HLA-DRA [+14276bp] C - 12 C vs. G 0.375 (C) 0.208 (C) >1 (-) 33 (-) <0.05
rs9268832 chr6:32427789 HLA-DRA [+14966bp] C - 12 T vs. C 0.35 (T) 0.4 (T) >1 (-) 40 (-) <0.05
rs67603244 chr6:32364984 BTNL2 C - 12 A vs. G 0.192 (G) 0.192 (G) <1 (-) 54 (-) <0.05
rs62402759 chr6:32365707 BTNL2 C - 12 T vs. C 0.167 (C) 0.358 (C) <1 (-) 52 (-) <0.05
rs7769693 chr6:32426458 HLA-DRA [+13635bp] C - 12 T vs. G - - >1 (-) 37 (-) <0.05
rs9268508 chr6:32377588 BTNL2 [+2683bp] C - 12 A vs. T 0.442 (T) 0.317 (T) <1 (-) 56 (-) <0.05
rs2294882 chr6:32367515 BTNL2 C - 12 T vs. C 0.192 (C) 0.367 (C) <1 (-) 53 (-) <0.05
rs4713523 chr6:32365971 BTNL2 C - 12 A vs. G 0.192 (A) 0.35 (A) >1 (-) 52 (-) <0.05
rs4713524 chr6:32366331 BTNL2 C - 12 C vs. G 0.192 (C) 0.367 (C) >1 (-) 52 (-) <0.05
rs4959097 chr6:32366625 BTNL2 C - 12 T vs. C 0.2 (C) 0.367 (C) <1 (-) 52 (-) <0.05
rs3763304 chr6:32369355 BTNL2 C - 12 T vs. C 0.192 (T) 0.217 (T) >1 (-) 55 (-) <0.05
rs3763306 chr6:32369643 BTNL2 C - 12 A vs. G 0.192 (G) 0.2 (G) <1 (-) 55 (-) <0.05
rs3763317 chr6:32376788 BTNL2 [+1883bp] C - 12 T vs. C 0.5 (C) 0.342 (C) <1 (-) 61 (-) <0.05
rs72847948 chr6:32365553 BTNL2 C - 12 T vs. C 0.15 (T) - >1 (-) 50 (-) <0.05
rs62402758 chr6:32365284 BTNL2 C - 12 A vs. T 0.192 (T) 0.208 (T) <1 (-) 54 (-) <0.05
rs114516436 chr6:32362011 BTNL2 C - 12 A vs. G 0.167 (G) 0.192 (G) <1 (-) 38 (-) <0.05
rs115880030 chr6:32362010 BTNL2 C - 12 T vs. C 0.167 (T) 0.192 (T) >1 (-) 38 (-) <0.05
rs41291806 chr6:32435823 HLA-DRA [+23000bp] C - 3 A vs. C - - >1 (-) 43 (-) <0.05
rs4496841 chr6:32389997 BTNL2 [+15092bp] C - 12 T vs. C - - <1 (-) 41 (-) <0.05
rs17577980 chr6:32359821 BTNL2 [-1919bp] C - 12 A vs. G 0.042 (A) - >1 (-) 30 (-) <0.05
rs28732208 chr6:32385119 BTNL2 [+10214bp] C - 12 T vs. C 0.183 (T) 0.017 (T) >1 (-) 47 (-) <0.05
rs9268670 chr6:32414287 HLA-DRA [+1464bp] C - 12 T vs. C 0.367 (T) 0.417 (T) >1 (-) 40 (-) <0.05
rs3135359 chr6:32390578 BTNL2 [+15673bp] C - 12 T vs. C - - >1 (-) 34 (-) <0.05
rs41291798 chr6:32431558 HLA-DRA [+18735bp] C - 11 A vs. C 0.042 (A) - >1 (-) 0 (-) <0.05
rs17208888 chr6:32379506 BTNL2 [+4601bp] C - 12 A vs. G 0.05 (A) - >1 (-) 32 (-) <0.05
rs9380294 chr6:32380909 BTNL2 [+6004bp] C - 12 A vs. C - 0.225 (C) <1 (-) 0 (-) <0.05
rs28895056 chr6:32417189 HLA-DRA [+4366bp] C - 12 A vs. G 0.075 (A) 0.025 (A) >1 (-) 63 (-) >0.05
rs28895055 chr6:32417185 HLA-DRA [+4362bp] C - 12 A vs. G 0.075 (G) - <1 (-) 63 (-) >0.05
rs7744304 chr6:32425487 HLA-DRA [+12664bp] C - 12 T vs. G 0.333 (G) 0.258 (G) <1 (-) 23 (-) >0.05

Association studies for this region [+]