HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13194556 chr6:32415805 HLA-DRA [+2982bp] C - 12 T vs. C 0.192 (C) 0.033 (C) <1 (-) 59 (-) >0.05
rs41291802 chr6:32433646 HLA-DRA [+20823bp] C - 5 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs12524667 chr6:32389334 BTNL2 [+14429bp] C - 12 T vs. C 0.142 (T) 0.033 (T) >1 (-) 62 (-) >0.05
rs145026354 chr6:32371727 BTNL2 C - 12 A vs. G - - <1 (-) 6 (-) >0.05
rs145097304 chr6:32371724 BTNL2 C - 12 T vs. C - - <1 (-) 6 (-) >0.05
rs9268505 chr6:32377408 BTNL2 [+2503bp] C - 12 T vs. C 0.35 (A) 0.333 (T) >1 (-) 62 (-) >0.05
rs17202899 chr6:32434481 HLA-DRA [+21658bp] C - 3 T vs. C 0.058 (C) - <1 (-) 41 (-) >0.05
rs115020225 chr6:32371731 BTNL2 C - 12 T vs. C - 0.133 (T) >1 (-) 0 (-) >0.05
rs28895112 chr6:32419972 HLA-DRA [+7149bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs7763262 chr6:32424882 HLA-DRA [+12059bp] C - 12 T vs. C 0.342 (T) 0.258 (T) >1 (-) 29 (-) >0.05
rs55890913 chr6:32385596 BTNL2 [+10691bp] C - 12 T vs. C 0.142 (C) 0.025 (C) <1 (-) 61 (-) >0.05
rs72847996 chr6:32384892 BTNL2 [+9987bp] C - 12 A vs. G 0.142 (A) - >1 (-) 61 (-) >0.05
rs9268803 chr6:32423237 HLA-DRA [+10414bp] C - 12 A vs. G - - >1 (-) 29 (-) >0.05
rs139776498 chr6:32366224 BTNL2 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs9268668 chr6:32413889 HLA-DRA [+1066bp] C - 12 A vs. C 0.342 (C) 0.325 (C) <1 (-) 22 (-) >0.05
rs9268812 chr6:32424568 HLA-DRA [+11745bp] C - 12 A vs. G 0.325 (A) 0.275 (A) >1 (-) 29 (-) >0.05
rs28895086 chr6:32418300 HLA-DRA [+5477bp] C - 12 C vs. G 0.192 (C) - >1 (-) 61 (-) >0.05
rs17208853 chr6:32376360 BTNL2 [+1455bp] C - 12 T vs. C 0.15 (C) 0.025 (C) <1 (-) 59 (-) >0.05
rs28895078 chr6:32417891 HLA-DRA [+5068bp] C - 12 C vs. G 0.192 (G) - <1 (-) 60 (-) >0.05
rs115653647 chr6:32370993 BTNL2 C - 12 T vs. C 0.025 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs6918317 chr6:32381210 BTNL2 [+6305bp] C - 12 T vs. C 0.433 (T) 0.333 (T) >1 (-) 47 (-) >0.05
rs7759742 chr6:32381736 BTNL2 [+6831bp] C - 12 A vs. T 0.433 (T) 0.317 (T) <1 (-) 49 (-) >0.05
rs78924784 chr6:32413719 HLA-DRA [+896bp] C - 4 A vs. T - - <1 (-) 0 (-) >0.05
rs28895051 chr6:32416909 HLA-DRA [+4086bp] C - 12 C vs. G 0.117 (G) - <1 (-) 60 (-) >0.05
rs28362684 chr6:32375018 BTNL2 [+113bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs9380293 chr6:32377284 BTNL2 [+2379bp] C - 12 T vs. C - 0.217 (T) >1 (-) 0 (-) >0.05
rs28452472 chr6:32394048 HLA-DRA [-13571bp] C - 12 A vs. G - - >1 (-) 61 (-) >0.05
rs73400850 chr6:32371697 BTNL2 C - 12 T vs. C 0.058 (T) 0.167 (T) >1 (-) 19 (-) >0.05
rs1143258 chr6:32359156 BTNL2 [-2584bp] C - 12 A vs. G 0.167 (G) 0.183 (G) <1 (-) 52 (-) >0.05
rs116607050 chr6:32369077 BTNL2 C - 12 T vs. C 0.025 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs17209091 chr6:32401785 HLA-DRA [-5834bp] C - 9 T vs. G - - >1 (-) 0 (-) >0.05
rs28895032 chr6:32416189 HLA-DRA [+3366bp] C - 12 A vs. T 0.192 (A) - >1 (-) 59 (-) >0.05
rs7770920 chr6:32444116 HLA-DRA [+31293bp] C - 3 A vs. T - - <1 (-) 0 (-) >0.05
rs9268830 chr6:32427572 HLA-DRA [+14749bp] C - 11 C vs. G 0.117 (G) 0.425 (G) <1 (-) 0 (-) >0.05
rs9268766 chr6:32418710 HLA-DRA [+5887bp] C - 12 A vs. C 0.325 (C) 0.258 (C) <1 (-) 30 (-) >0.05
rs3763327 chr6:32413830 HLA-DRA [+1007bp] C - 12 C vs. G 0.342 (G) 0.325 (G) <1 (-) 27 (-) >0.05
rs114693440 chr6:32372046 BTNL2 C - 12 A vs. G - - <1 (-) 1 (-) >0.05
rs116483918 chr6:32372168 BTNL2 C - 12 T vs. G - - >1 (-) 1 (-) >0.05
rs62402742 chr6:32359163 BTNL2 [-2577bp] C - 12 A vs. G 0.167 (A) 0.183 (A) >1 (-) 52 (-) >0.05
rs2213585 chr6:32413150 HLA-DRA [+327bp] C - 12 A vs. G 0.35 (G) 0.325 (G) <1 (-) 27 (-) >0.05
rs114369132 chr6:32409141 HLA-DRA C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs7194 chr6:32412480 HLA-DRA C - 12 A vs. G 0.35 (G) 0.325 (G) <1 (-) 27 (-) >0.05
rs2213584 chr6:32413259 HLA-DRA [+436bp] C - 12 A vs. G 0.35 (A) 0.325 (A) >1 (-) 27 (-) >0.05
rs6937696 chr6:32418018 HLA-DRA [+5195bp] C - 12 T vs. C 0.325 (C) 0.25 (C) <1 (-) 30 (-) >0.05
rs6937545 chr6:32418031 HLA-DRA [+5208bp] C - 12 A vs. C 0.325 (A) 0.25 (A) >1 (-) 30 (-) >0.05
rs116529593 chr6:32409400 HLA-DRA C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs2213586 chr6:32413094 HLA-DRA [+271bp] C - 12 A vs. G 0.35 (A) 0.342 (A) >1 (-) 26 (-) >0.05
rs7195 chr6:32412539 HLA-DRA C - 12 A vs. G 0.35 (A) 0.325 (A) >1 (-) 27 (-) >0.05
rs9268659 chr6:32410941 HLA-DRA C - 12 T vs. C 0.4 (T) 0.325 (T) >1 (-) 27 (-) >0.05
rs6924760 chr6:32438604 HLA-DRA [+25781bp] C - 3 A vs. T 0.017 (T) 0.075 (T) >1 (-) 12 (-) >0.05

Association studies for this region [+]