HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8084 chr6:32411035 HLA-DRA C - 12 A vs. C 0.392 (A) 0.325 (A) >1 (-) 28 (-) >0.05
rs17208755 chr6:32361583 BTNL2 [-157bp] C - 12 A vs. T 0.167 (A) 0.05 (A) >1 (-) 50 (-) >0.05
rs7192 chr6:32411646 HLA-DRA C - 12 T vs. G 0.35 (T) 0.325 (T) >1 (-) 27 (-) >0.05
rs3817981 chr6:32360945 BTNL2 [-795bp] C - 12 T vs. C 0.167 (C) 0.05 (C) <1 (-) 53 (-) >0.05
rs17202316 chr6:32360955 BTNL2 [-785bp] C - 12 A vs. G 0.142 (A) 0.05 (A) >1 (-) 53 (-) >0.05
rs2227139 chr6:32413459 HLA-DRA [+636bp] C - 12 A vs. G 0.35 (G) 0.325 (G) <1 (-) 28 (-) >0.05
rs7748472 chr6:32448763 HLA-DRA [+35940bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs7748494 chr6:32448808 HLA-DRA [+35985bp] C - 3 A vs. G - 0.058 (G) >1 (-) 0 (-) >0.05
rs17202400 chr6:32361525 BTNL2 [-215bp] C - 12 T vs. C 0.175 (C) 0.042 (C) <1 (-) 49 (-) >0.05
rs115293482 chr6:32371739 BTNL2 C - 12 T vs. G 0.058 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs74506038 chr6:32371743 BTNL2 C - 12 C vs. G 0.058 (G) 0.158 (G) <1 (-) 0 (-) >0.05
rs17202456 chr6:32363774 BTNL2 C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 48 (-) >0.05
rs114366563 chr6:32371390 BTNL2 C - 12 T vs. G 0.033 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs9268628 chr6:32405865 HLA-DRA [-1754bp] C - 12 A vs. C 0.117 (C) 0.342 (C) <1 (-) 22 (-) >0.05
rs12528939 chr6:32362930 BTNL2 C - 12 T vs. C 0.167 (T) 0.042 (T) >1 (-) 48 (-) >0.05
rs68190545 chr6:32362075 BTNL2 C - 12 A vs. G 0.158 (G) 0.192 (G) <1 (-) 48 (-) >0.05
rs28895094 chr6:32418843 HLA-DRA [+6020bp] C - 12 A vs. T 0.133 (T) - <1 (-) 61 (-) >0.05
rs3763313 chr6:32376471 BTNL2 [+1566bp] C - 12 A vs. C 0.217 (C) 0.192 (C) <1 (-) 62 (-) >0.05
rs9268576 chr6:32395641 HLA-DRA [-11978bp] C - 12 T vs. C 0.05 (C) 0.142 (C) <1 (-) 1 (-) >0.05
rs2395189 chr6:32433308 HLA-DRA [+20485bp] C - 4 A vs. C - - >1 (-) 3 (-) >0.05
rs17208734 chr6:32361424 BTNL2 [-316bp] C - 12 T vs. C 0.167 (C) 0.05 (C) <1 (-) 50 (-) >0.05
rs12529049 chr6:32357715 BTNL2 [-4025bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 48 (-) >0.05
rs17423698 chr6:32358368 BTNL2 [-3372bp] C - 12 T vs. C 0.167 (C) 0.05 (C) <1 (-) 44 (-) >0.05
rs72847931 chr6:32362020 BTNL2 C - 12 T vs. C 0.167 (T) 0.192 (T) >1 (-) 49 (-) >0.05
rs41291794 chr6:32425762 HLA-DRA [+12939bp] C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs60234039 chr6:32371294 BTNL2 C - 12 C vs. G 0.05 (G) 0.325 (G) <1 (-) 41 (-) >0.05
rs58110932 chr6:32371292 BTNL2 C - 12 A vs. T 0.05 (T) 0.325 (T) <1 (-) 41 (-) >0.05
rs17208748 chr6:32361566 BTNL2 [-174bp] C - 12 A vs. G 0.167 (G) 0.05 (G) <1 (-) 48 (-) >0.05
rs17202372 chr6:32361255 BTNL2 [-485bp] C - 12 A vs. G 0.167 (G) 0.05 (G) <1 (-) 58 (-) >0.05
rs17202365 chr6:32361251 BTNL2 [-489bp] C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 58 (-) >0.05
rs1143257 chr6:32359133 BTNL2 [-2607bp] C - 12 A vs. G 0.167 (A) 0.2 (A) >1 (-) 49 (-) >0.05
rs17202302 chr6:32358205 BTNL2 [-3535bp] C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 49 (-) >0.05
rs62402754 chr6:32359389 BTNL2 [-2351bp] C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 49 (-) >0.05
rs17203458 chr6:32443175 HLA-DRA [+30352bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs62402741 chr6:32358728 BTNL2 [-3012bp] C - 12 A vs. G 0.167 (A) 0.217 (A) >1 (-) 52 (-) >0.05
rs116535033 chr6:32385583 BTNL2 [+10678bp] C - 12 T vs. G - - >1 (-) 5 (-) >0.05
rs17423691 chr6:32358345 BTNL2 [-3395bp] C - 12 A vs. C 0.167 (A) 0.05 (A) >1 (-) 48 (-) >0.05
rs9405098 chr6:32379736 BTNL2 [+4831bp] C - 12 A vs. G - 0.217 (A) >1 (-) 0 (-) >0.05
rs72847932 chr6:32362085 BTNL2 C - 12 T vs. C 0.15 (T) 0.192 (T) >1 (-) 48 (-) >0.05
rs66721723 chr6:32359800 BTNL2 [-1940bp] C - 12 A vs. T 0.167 (A) - >1 (-) 49 (-) >0.05
rs17423732 chr6:32359617 BTNL2 [-2123bp] C - 12 A vs. C 0.167 (C) 0.05 (C) <1 (-) 50 (-) >0.05
rs67019312 chr6:32358883 BTNL2 [-2857bp] C - 12 T vs. C 0.167 (C) 0.025 (C) <1 (-) 49 (-) >0.05
rs9268796 chr6:32421329 HLA-DRA [+8506bp] C - 12 T vs. G 0.358 (T) 0.442 (T) <1 (-) 59 (-) >0.05
rs67808421 chr6:32362272 BTNL2 C - 12 A vs. T 0.167 (T) 0.05 (T) <1 (-) 48 (-) >0.05
rs17495592 chr6:32358533 BTNL2 [-3207bp] C - 12 A vs. G 0.167 (G) 0.192 (G) <1 (-) 51 (-) >0.05
rs3817972 chr6:32361130 BTNL2 [-610bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 48 (-) >0.05
rs3817980 chr6:32360970 BTNL2 [-770bp] C - 12 T vs. C 0.158 (T) 0.05 (T) >1 (-) 47 (-) >0.05
rs62402755 chr6:32360714 BTNL2 [-1026bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 49 (-) >0.05
rs116516376 chr6:32371414 BTNL2 C - 12 T vs. G - 0.142 (T) >1 (-) 24 (-) >0.05
rs3817976 chr6:32361003 BTNL2 [-737bp] C - 12 T vs. C 0.167 (T) 0.033 (T) >1 (-) 47 (-) >0.05

Association studies for this region [+]