HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13208102 chr6:32421074 HLA-DRA [+8251bp] C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs35880697 chr6:32433759 HLA-DRA [+20936bp] C - 4 T vs. C - - <1 (-) 16 (-) >0.05
rs17202682 chr6:32397308 HLA-DRA [-10311bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs28895110 chr6:32419934 HLA-DRA [+7111bp] C - 12 C vs. G 0.183 (G) - <1 (-) 62 (-) >0.05
rs17202309 chr6:32358213 BTNL2 [-3527bp] C - 12 T vs. C 0.167 (C) 0.2 (C) <1 (-) 52 (-) >0.05
rs72847907 chr6:32359611 BTNL2 [-2129bp] C - 12 A vs. G 0.167 (G) 0.167 (G) <1 (-) 52 (-) >0.05
rs34926345 chr6:32361809 BTNL2 C - 12 T vs. C 0.158 (C) 0.05 (C) <1 (-) 48 (-) >0.05
rs67588283 chr6:32362217 BTNL2 C - 12 A vs. G 0.158 (G) 0.2 (G) <1 (-) 51 (-) >0.05
rs12525722 chr6:32358163 BTNL2 [-3577bp] C - 12 A vs. G 0.167 (G) 0.192 (G) <1 (-) 53 (-) >0.05
rs17208657 chr6:32358144 BTNL2 [-3596bp] C - 12 T vs. C 0.167 (C) 0.2 (C) <1 (-) 53 (-) >0.05
rs17203444 chr6:32443033 HLA-DRA [+30210bp] C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs17203430 chr6:32443031 HLA-DRA [+30208bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs41407045 chr6:32362408 BTNL2 C - 12 A vs. G 0.167 (A) 0.192 (A) >1 (-) 50 (-) >0.05
rs17423753 chr6:32360341 BTNL2 [-1399bp] C - 12 A vs. C 0.175 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs16870123 chr6:32359460 BTNL2 [-2280bp] C - 12 A vs. G 0.167 (A) 0.142 (A) >1 (-) 49 (-) >0.05
rs17208650 chr6:32358113 BTNL2 [-3627bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 50 (-) >0.05
rs17202358 chr6:32361223 BTNL2 [-517bp] C - 12 T vs. C 0.175 (T) 0.05 (T) >1 (-) 49 (-) >0.05
rs41449245 chr6:32362669 BTNL2 C - 12 T vs. G 0.167 (G) 0.2 (G) <1 (-) 51 (-) >0.05
rs67124304 chr6:32362128 BTNL2 C - 12 A vs. G 0.167 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs72847934 chr6:32362182 BTNL2 C - 12 T vs. C 0.167 (C) 0.192 (C) <1 (-) 51 (-) >0.05
rs17209803 chr6:32443061 HLA-DRA [+30238bp] C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs9268560 chr6:32389512 BTNL2 [+14607bp] C - 12 C vs. G 0.45 (C) 0.492 (G) >1 (-) 21 (-) >0.05
rs7744667 chr6:32368621 BTNL2 C - 12 T vs. C - - <1 (-) 52 (-) >0.05
rs13207455 chr6:32420600 HLA-DRA [+7777bp] C - 12 A vs. G 0.183 (A) - >1 (-) 63 (-) >0.05
rs61550563 chr6:32442391 HLA-DRA [+29568bp] C - 3 A vs. C 0.017 (C) 0.025 (C) >1 (-) 0 (-) >0.05
rs140189425 chr6:32428993 HLA-DRA [+16170bp] C - 3 T vs. C - - <1 (-) 53 (-) >0.05
rs12529106 chr6:32358008 BTNL2 [-3732bp] C - 12 A vs. G 0.133 (A) 0.2 (A) >1 (-) 47 (-) >0.05
rs12529107 chr6:32358011 BTNL2 [-3729bp] C - 12 A vs. G 0.142 (A) 0.2 (A) >1 (-) 47 (-) >0.05
rs41535850 chr6:32362639 BTNL2 C - 12 A vs. G 0.167 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs41443753 chr6:32362433 BTNL2 C - 12 A vs. C 0.167 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs41499544 chr6:32362453 BTNL2 C - 12 A vs. G 0.167 (G) 0.2 (G) <1 (-) 51 (-) >0.05
rs17495612 chr6:32359431 BTNL2 [-2309bp] C - 12 T vs. C 0.167 (C) 0.2 (C) <1 (-) 52 (-) >0.05
rs17208741 chr6:32361445 BTNL2 [-295bp] C - 12 T vs. C 0.167 (C) 0.042 (C) <1 (-) 51 (-) >0.05
rs17202435 chr6:32362832 BTNL2 C - 12 A vs. G 0.167 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs114926982 chr6:32390197 BTNL2 [+15292bp] C - 12 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs17202393 chr6:32361485 BTNL2 [-255bp] C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 51 (-) >0.05
rs17202428 chr6:32361694 BTNL2 [-46bp] C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 49 (-) >0.05
rs17202414 chr6:32361677 BTNL2 [-63bp] C - 12 A vs. G 0.167 (A) 0.05 (A) >1 (-) 49 (-) >0.05
rs111682962 chr6:32360443 BTNL2 [-1297bp] C - 12 T vs. C 0.158 (T) 0.183 (T) >1 (-) 50 (-) >0.05
rs28895045 chr6:32416633 HLA-DRA [+3810bp] C - 12 T vs. C 0.133 (T) - >1 (-) 63 (-) >0.05
rs17208727 chr6:32361408 BTNL2 [-332bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 47 (-) >0.05
rs72847940 chr6:32362389 BTNL2 C - 12 A vs. G 0.167 (A) 0.183 (A) >1 (-) 50 (-) >0.05
rs75624717 chr6:32360050 BTNL2 [-1690bp] C - 12 A vs. G - - >1 (-) 53 (-) >0.05
rs78659081 chr6:32360060 BTNL2 [-1680bp] C - 12 T vs. C - 0.183 (C) <1 (-) 53 (-) >0.05
rs113485731 chr6:32360477 BTNL2 [-1263bp] C - 12 A vs. T 0.167 (A) 0.042 (A) >1 (-) 50 (-) >0.05
rs35624343 chr6:32361762 BTNL2 C - 12 A vs. G 0.158 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs41323148 chr6:32361842 BTNL2 C - 12 A vs. G 0.133 (A) 0.058 (A) >1 (-) 49 (-) >0.05
rs41423345 chr6:32361841 BTNL2 C - 12 T vs. C 0.142 (C) 0.05 (C) <1 (-) 49 (-) >0.05
rs35194487 chr6:32361943 BTNL2 C - 12 T vs. C 0.142 (T) 0.2 (T) >1 (-) 54 (-) >0.05
rs35837993 chr6:32361953 BTNL2 C - 12 A vs. G 0.142 (G) 0.2 (G) <1 (-) 54 (-) >0.05

Association studies for this region [+]