HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113373443 chr6:32359241 BTNL2 [-2499bp] C - 12 A vs. G 0.167 (G) - <1 (-) 54 (-) >0.05
rs72847914 chr6:32360644 BTNL2 [-1096bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 49 (-) >0.05
rs72847912 chr6:32360641 BTNL2 [-1099bp] C - 12 A vs. G 0.167 (G) 0.05 (G) <1 (-) 49 (-) >0.05
rs117182873 chr6:32367631 BTNL2 C - 6 A vs. G - 0.15 (A) >1 (-) 0 (-) >0.05
rs3817974 chr6:32361035 BTNL2 [-705bp] C - 12 T vs. C 0.167 (C) 0.2 (C) <1 (-) 51 (-) >0.05
rs17209754 chr6:32442703 HLA-DRA [+29880bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs2894258 chr6:32433312 HLA-DRA [+20489bp] C - 4 A vs. G - - >1 (-) 8 (-) >0.05
chr6:32413617 chr6:32413617 HLA-DRA [+794bp] C - 6 T vs. G - - >1 (-) 0 (-) >0.05
rs9269016 chr6:32436670 HLA-DRA [+23847bp] C - 3 A vs. G - - <1 (-) 52 (-) >0.05
rs117501081 chr6:32369466 BTNL2 C - 6 T vs. C - 0.125 (C) <1 (-) 0 (-) >0.05
rs1143260 chr6:32359227 BTNL2 [-2513bp] C - 12 A vs. G 0.167 (G) 0.008 (G) <1 (-) 54 (-) >0.05
rs13220135 chr6:32423708 HLA-DRA [+10885bp] C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs13220234 chr6:32423707 HLA-DRA [+10884bp] C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs117065092 chr6:32369454 BTNL2 C - 6 A vs. G - 0.142 (A) >1 (-) 0 (-) >0.05
rs34525489 chr6:32361894 BTNL2 C - 12 A vs. G 0.167 (G) 0.05 (G) <1 (-) 50 (-) >0.05
rs150777965 chr6:32362458 BTNL2 C - 6 A vs. G - - >1 (-) 1 (-) >0.05
rs1143261 chr6:32359230 BTNL2 [-2510bp] C - 12 T vs. C 0.167 (C) 0.192 (C) <1 (-) 55 (-) >0.05
rs66987263 chr6:32360589 BTNL2 [-1151bp] C - 12 A vs. G 0.167 (G) 0.05 (G) <1 (-) 48 (-) >0.05
rs1143259 chr6:32359208 BTNL2 [-2532bp] C - 12 A vs. G 0.167 (A) 0.2 (A) >1 (-) 53 (-) >0.05
rs72847937 chr6:32362262 BTNL2 C - 12 A vs. G 0.167 (G) 0.2 (G) <1 (-) 51 (-) >0.05
rs28895154 chr6:32422136 HLA-DRA [+9313bp] C - 12 A vs. G - - <1 (-) 63 (-) >0.05
rs13212411 chr6:32422305 HLA-DRA [+9482bp] C - 12 T vs. C - - >1 (-) 63 (-) >0.05
rs67722415 chr6:32360532 BTNL2 [-1208bp] C - 12 A vs. G 0.167 (G) 0.192 (G) <1 (-) 48 (-) >0.05
rs67725213 chr6:32360551 BTNL2 [-1189bp] C - 12 C vs. G 0.158 (G) 0.175 (G) <1 (-) 48 (-) >0.05
rs13206899 chr6:32427581 HLA-DRA [+14758bp] C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs9469120 chr6:32433057 HLA-DRA [+20234bp] C - 5 A vs. C 0.017 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs28362678 chr6:32362745 BTNL2 C - 12 A vs. G 0.167 (A) 0.2 (A) >1 (-) 51 (-) >0.05
rs2395190 chr6:32433318 HLA-DRA [+20495bp] C - 4 T vs. C - - <1 (-) 6 (-) >0.05
rs2894259 chr6:32433315 HLA-DRA [+20492bp] C - 4 A vs. G - - <1 (-) 6 (-) >0.05
rs80301380 chr6:32360069 BTNL2 [-1671bp] C - 12 A vs. G - - <1 (-) 52 (-) >0.05
rs10807101 chr6:32385414 BTNL2 [+10509bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs62402743 chr6:32359171 BTNL2 [-2569bp] C - 12 T vs. C 0.167 (T) 0.05 (T) >1 (-) 49 (-) >0.05
rs9968904 chr6:32392710 HLA-DRA [-14909bp] C - 12 A vs. C 0.017 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs111255178 chr6:32420943 HLA-DRA [+8120bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs68146269 chr6:32359904 BTNL2 [-1836bp] C - 12 T vs. C 0.167 (C) 0.125 (C) <1 (-) 53 (-) >0.05
rs28362677 chr6:32362741 BTNL2 C - 12 T vs. C 0.167 (T) 0.2 (T) >1 (-) 52 (-) >0.05
rs3135345 chr6:32394585 HLA-DRA [-13034bp] C - 12 T vs. C 0.125 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs28895036 chr6:32416466 HLA-DRA [+3643bp] C - 12 A vs. C - - >1 (-) 60 (-) >0.05
rs28394414 chr6:32435515 HLA-DRA [+22692bp] C - 3 T vs. C - - <1 (-) 31 (-) >0.05
rs34200087 chr6:32438691 HLA-DRA [+25868bp] C - 3 A vs. G 0.142 (A) 0.033 (A) <1 (-) 24 (-) >0.05
rs28895037 chr6:32416479 HLA-DRA [+3656bp] C - 12 T vs. C - - >1 (-) 60 (-) >0.05
rs17202745 chr6:32401889 HLA-DRA [-5730bp] C - 12 A vs. G 0.008 (A) - >1 (-) 7 (-) >0.05
rs41399051 chr6:32369601 BTNL2 C - 11 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05
rs3817969 chr6:32361388 BTNL2 [-352bp] C - 12 T vs. C 0.167 (T) 0.2 (T) >1 (-) 47 (-) >0.05
rs743862 chr6:32381939 BTNL2 [+7034bp] C - 12 T vs. C 0.292 (C) 0.083 (C) <1 (-) 39 (-) >0.05
rs12525692 chr6:32438546 HLA-DRA [+25723bp] C - 3 A vs. T 0.142 (T) 0.033 (T) >1 (-) 27 (-) >0.05
rs9268636 chr6:32406611 HLA-DRA [-1008bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs28895113 chr6:32419988 HLA-DRA [+7165bp] C - 12 C vs. G 0.167 (G) - <1 (-) 64 (-) >0.05
rs12524496 chr6:32438513 HLA-DRA [+25690bp] C - 3 C vs. G - - <1 (-) 28 (-) >0.05
rs3135393 chr6:32408842 HLA-DRA C - 12 A vs. G 0.125 (G) 0.125 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]