HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28895146 chr6:32421910 HLA-DRA [+9087bp] C - 12 A vs. G 0.192 (G) - <1 (-) 63 (-) >0.05
rs28831180 chr6:32435921 HLA-DRA [+23098bp] C - 3 C vs. G - - >1 (-) 42 (-) >0.05
rs17208699 chr6:32361080 BTNL2 [-660bp] C - 12 T vs. G 0.167 (G) 0.042 (G) <1 (-) 44 (-) >0.05
rs3135392 chr6:32409242 HLA-DRA C - 12 A vs. C 0.333 (A) 0.292 (A) >1 (-) 31 (-) >0.05
rs28895043 chr6:32416584 HLA-DRA [+3761bp] C - 12 A vs. T - - >1 (-) 61 (-) >0.05
rs28895096 chr6:32418859 HLA-DRA [+6036bp] C - 12 C vs. G 0.1 (C) - >1 (-) 61 (-) >0.05
rs17202892 chr6:32434479 HLA-DRA [+21656bp] C - 3 A vs. C 0.142 (A) 0.033 (A) <1 (-) 34 (-) >0.05
rs41343746 chr6:32363790 BTNL2 C - 7 A vs. G - 0.158 (G) <1 (-) 0 (-) >0.05
rs28895097 chr6:32418869 HLA-DRA [+6046bp] C - 12 T vs. C 0.125 (T) - >1 (-) 61 (-) >0.05
rs12529318 chr6:32434314 HLA-DRA [+21491bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs41398448 chr6:32363786 BTNL2 C - 7 A vs. G - 0.15 (A) >1 (-) 0 (-) >0.05
rs117303587 chr6:32363772 BTNL2 C - 7 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs12215079 chr6:32380678 BTNL2 [+5773bp] C - 12 A vs. C - 0.042 (A) <1 (-) 0 (-) >0.05
rs62404572 chr6:32372328 BTNL2 C - 12 A vs. G 0.058 (A) 0.183 (A) >1 (-) 28 (-) >0.05
rs62404573 chr6:32372337 BTNL2 C - 12 A vs. G 0.067 (A) 0.167 (A) >1 (-) 28 (-) >0.05
rs35421268 chr6:32435196 HLA-DRA [+22373bp] C - 3 T vs. C - - <1 (-) 41 (-) >0.05
rs41392447 chr6:32363973 BTNL2 C - 7 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs57723712 chr6:32423409 HLA-DRA [+10586bp] C - 11 A vs. C - 0.167 (C) <1 (-) 28 (-) >0.05
rs13198982 chr6:32418893 HLA-DRA [+6070bp] C - 12 T vs. C 0.158 (T) - >1 (-) 60 (-) >0.05
rs28895039 chr6:32416534 HLA-DRA [+3711bp] C - 12 T vs. C - - <1 (-) 60 (-) >0.05
rs28895040 chr6:32416550 HLA-DRA [+3727bp] C - 12 A vs. G - - <1 (-) 60 (-) >0.05
rs114394166 chr6:32371840 BTNL2 C - 12 T vs. C 0.058 (T) 0.175 (T) >1 (-) 26 (-) >0.05
rs73400852 chr6:32371800 BTNL2 C - 12 T vs. C 0.058 (T) 0.183 (T) >1 (-) 26 (-) >0.05
rs73400855 chr6:32371818 BTNL2 C - 12 C vs. G 0.05 (C) 0.175 (C) >1 (-) 26 (-) >0.05
rs28895038 chr6:32416532 HLA-DRA [+3709bp] C - 12 A vs. T - - >1 (-) 60 (-) >0.05
rs13204271 chr6:32420525 HLA-DRA [+7702bp] C - 12 A vs. G - - >1 (-) 61 (-) >0.05
rs11961777 chr6:32379535 BTNL2 [+4630bp] C - 12 T vs. C - 0.133 (C) >1 (-) 14 (-) >0.05
rs28895165 chr6:32422749 HLA-DRA [+9926bp] C - 12 T vs. C 0.192 (C) - <1 (-) 63 (-) >0.05
rs1894552 chr6:32395465 HLA-DRA [-12154bp] C - 12 T vs. G 0.117 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs73400865 chr6:32372032 BTNL2 C - 12 A vs. G 0.058 (G) 0.183 (G) <1 (-) 30 (-) >0.05
rs10947260 chr6:32373185 BTNL2 C - 12 T vs. C 0.058 (C) 0.183 (C) <1 (-) 30 (-) >0.05
rs73400869 chr6:32372112 BTNL2 C - 12 A vs. G 0.058 (G) 0.183 (G) <1 (-) 30 (-) >0.05
rs59281193 chr6:32423601 HLA-DRA [+10778bp] C - 11 T vs. C - - >1 (-) 28 (-) >0.05
rs62404576 chr6:32373829 BTNL2 C - 12 T vs. G 0.067 (T) 0.183 (T) >1 (-) 30 (-) >0.05
rs13199259 chr6:32419117 HLA-DRA [+6294bp] C - 12 T vs. C 0.142 (T) 0.033 (T) >1 (-) 62 (-) >0.05
rs73400861 chr6:32371987 BTNL2 C - 12 A vs. G 0.058 (A) 0.183 (A) >1 (-) 30 (-) >0.05
rs73400863 chr6:32372007 BTNL2 C - 12 T vs. C 0.058 (C) 0.183 (C) <1 (-) 30 (-) >0.05
rs73400859 chr6:32371954 BTNL2 C - 12 A vs. G 0.058 (A) 0.183 (A) >1 (-) 30 (-) >0.05
rs62404574 chr6:32372353 BTNL2 C - 12 A vs. G 0.058 (G) 0.183 (G) <1 (-) 29 (-) >0.05
rs28362682 chr6:32372863 BTNL2 C - 12 A vs. T 0.058 (T) 0.183 (T) <1 (-) 30 (-) >0.05
rs62404570 chr6:32372251 BTNL2 C - 12 T vs. C 0.058 (C) 0.167 (C) <1 (-) 30 (-) >0.05
rs62404571 chr6:32372321 BTNL2 C - 12 T vs. C 0.058 (T) 0.183 (T) >1 (-) 30 (-) >0.05
rs62404575 chr6:32372635 BTNL2 C - 12 A vs. T 0.058 (A) 0.183 (A) >1 (-) 30 (-) >0.05
rs73400875 chr6:32372396 BTNL2 C - 12 T vs. C 0.058 (C) 0.183 (C) <1 (-) 30 (-) >0.05
rs73400877 chr6:32372422 BTNL2 C - 12 C vs. G 0.058 (G) 0.183 (G) <1 (-) 30 (-) >0.05
rs28362683 chr6:32372963 BTNL2 C - 12 A vs. G 0.058 (A) 0.183 (A) >1 (-) 30 (-) >0.05
rs17209161 chr6:32433804 HLA-DRA [+20981bp] C - 4 T vs. C - - <1 (-) 11 (-) >0.05
rs7760260 chr6:32421071 HLA-DRA [+8248bp] C - 11 A vs. G - - >1 (-) 33 (-) >0.05
rs73400844 chr6:32371572 BTNL2 C - 12 A vs. G 0.058 (G) 0.158 (G) <1 (-) 29 (-) >0.05
rs13215109 chr6:32418880 HLA-DRA [+6057bp] C - 12 T vs. C 0.142 (C) - <1 (-) 60 (-) >0.05

Association studies for this region [+]