HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs111664049 chr6:32390130 BTNL2 [+15225bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs6930571 chr6:32383208 BTNL2 [+8303bp] C - 12 T vs. G 0.125 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs3135382 chr6:32383441 BTNL2 [+8536bp] C - 12 T vs. G 0.125 (G) - >1 (-) 0 (-) >0.05
rs6457571 chr6:32386506 BTNL2 [+11601bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2105903 chr6:32395656 HLA-DRA [-11963bp] C - 12 A vs. T 0.125 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs117309689 chr6:32415814 HLA-DRA [+2991bp] C - 9 T vs. C - 0.075 (T) >1 (-) 0 (-) >0.05
rs77709411 chr6:32380761 BTNL2 [+5856bp] C - 12 A vs. C - - >1 (-) 6 (-) >0.05
rs17202787 chr6:32428397 HLA-DRA [+15574bp] C - 9 A vs. C 0.067 (A) - <1 (-) 0 (-) >0.05
rs4988822 chr6:32398975 HLA-DRA [-8644bp] C - 12 T vs. C 0.267 (T) 0.158 (T) >1 (-) 47 (-) >0.05
rs6457570 chr6:32386495 BTNL2 [+11590bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs117345304 chr6:32367693 BTNL2 C - 9 T vs. C - 0.15 (T) <1 (-) 0 (-) >0.05
rs2395171 chr6:32394537 HLA-DRA [-13082bp] C - 12 T vs. C 0.125 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs3129870 chr6:32406100 HLA-DRA [-1519bp] C - 12 T vs. C - - >1 (-) 49 (-) >0.05
rs3129842 chr6:32394060 HLA-DRA [-13559bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs59803593 chr6:32424496 HLA-DRA [+11673bp] C - 3 A vs. G 0.017 (G) 0.05 (G) >1 (-) 62 (-) >0.05
rs9268532 chr6:32383249 BTNL2 [+8344bp] C - 12 T vs. C 0.117 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs2395170 chr6:32394313 HLA-DRA [-13306bp] C - 12 A vs. C 0.125 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs34014061 chr6:32433508 HLA-DRA [+20685bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs73400847 chr6:32371640 BTNL2 C - 12 A vs. G 0.058 (A) 0.167 (A) >1 (-) 28 (-) >0.05
rs74389891 chr6:32371667 BTNL2 C - 12 A vs. G 0.058 (A) 0.175 (A) >1 (-) 24 (-) >0.05
rs9268531 chr6:32383246 BTNL2 [+8341bp] C - 12 T vs. G 0.125 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs9268534 chr6:32383307 BTNL2 [+8402bp] C - 12 T vs. G 0.117 (G) - >1 (-) 0 (-) >0.05
rs62404578 chr6:32375347 BTNL2 [+442bp] C - 11 T vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs113104921 chr6:32377878 BTNL2 [+2973bp] C - 12 T vs. G - 0.1 (G) >1 (-) 0 (-) >0.05
rs6908065 chr6:32383341 BTNL2 [+8436bp] C - 12 A vs. C 0.125 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs113928914 chr6:32423195 HLA-DRA [+10372bp] C - 11 A vs. G - - >1 (-) 31 (-) >0.05
rs6908056 chr6:32383360 BTNL2 [+8455bp] C - 12 A vs. G 0.125 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs3763326 chr6:32413557 HLA-DRA [+734bp] C - 11 T vs. C 0.017 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs3135349 chr6:32394027 HLA-DRA [-13592bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2157333 chr6:32392591 HLA-DRA [-15028bp] C - 12 T vs. C 0.208 (C) 0.475 (T) >1 (-) 0 (-) >0.05
rs17209007 chr6:32388547 BTNL2 [+13642bp] C - 9 A vs. G - - <1 (-) 11 (-) >0.05
rs118131405 chr6:32363649 BTNL2 C - 3 A vs. G - 0.158 (A) <1 (-) 0 (-) >0.05
rs2157334 chr6:32392543 HLA-DRA [-15076bp] C - 12 T vs. C 0.125 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs28572074 chr6:32383378 BTNL2 [+8473bp] C - 11 T vs. C - 0.033 (C) >1 (-) 0 (-) >0.05
rs73400833 chr6:32370406 BTNL2 C - 12 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs117590626 chr6:32416250 HLA-DRA [+3427bp] C - 11 A vs. C - 0.058 (A) <1 (-) 0 (-) >0.05
rs112162078 chr6:32390621 BTNL2 [+15716bp] C - 12 A vs. G - - <1 (-) 4 (-) >0.05
rs115649989 chr6:32431488 HLA-DRA [+18665bp] C - 9 A vs. C 0.017 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs3135356 chr6:32391516 HLA-DRA [-16103bp] C - 12 A vs. G 0.125 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs11752739 chr6:32402098 HLA-DRA [-5521bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs9268897 chr6:32431976 HLA-DRA [+19153bp] C - 3 A vs. C - 0.242 (A) <1 (-) 0 (-) >0.05
rs732163 chr6:32394911 HLA-DRA [-12708bp] C - 12 A vs. G 0.083 (A) 0.317 (A) >1 (-) 4 (-) >0.05
rs6930933 chr6:32383410 BTNL2 [+8505bp] C - 12 T vs. G 0.125 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs9268626 chr6:32405044 HLA-DRA [-2575bp] C - 11 C vs. G 0.05 (C) 0.142 (C) >1 (-) 14 (-) >0.05
rs74412040 chr6:32385381 BTNL2 [+10476bp] C - 11 A vs. G - 0.033 (A) <1 (-) 0 (-) >0.05
rs2001100 chr6:32383488 BTNL2 [+8583bp] C - 12 A vs. T 0.125 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs2001099 chr6:32383633 BTNL2 [+8728bp] C - 12 C vs. G 0.125 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs2001098 chr6:32383837 BTNL2 [+8932bp] C - 12 A vs. G 0.125 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs2001097 chr6:32383858 BTNL2 [+8953bp] C - 12 T vs. G 0.125 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs2395159 chr6:32384077 BTNL2 [+9172bp] C - 12 T vs. C 0.125 (T) 0.05 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]