HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9268878 chr6:32431292 HLA-DRA [+18469bp] C - 12 A vs. T 0.15 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs73729229 chr6:32392073 HLA-DRA [-15546bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs16870148 chr6:32399636 HLA-DRA [-7983bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs200277885 chr6:32359513 BTNL2 [-2227bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs116227556 chr6:32389618 BTNL2 [+14713bp] C - 10 A vs. G - 0.075 (G) <1 (-) 0 (-) >0.05
rs116993778 chr6:32359507 BTNL2 [-2233bp] C - 7 A vs. G - 0.117 (A) <1 (-) 0 (-) >0.05
rs4280993 chr6:32430604 HLA-DRA [+17781bp] C - 12 A vs. C 0.15 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs4434496 chr6:32430508 HLA-DRA [+17685bp] C - 12 T vs. C 0.158 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs4601112 chr6:32426271 HLA-DRA [+13448bp] C - 12 T vs. C 0.133 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs9268489 chr6:32368709 BTNL2 C - 12 A vs. G - - >1 (-) 5 (-) >0.05
rs13198784 chr6:32425958 HLA-DRA [+13135bp] C - 11 A vs. C - - >1 (-) 59 (-) >0.05
rs13198660 chr6:32425964 HLA-DRA [+13141bp] C - 11 A vs. G 0.142 (G) - <1 (-) 59 (-) >0.05
rs117983449 chr6:32366141 BTNL2 C - 10 A vs. G - 0.15 (G) <1 (-) 0 (-) >0.05
rs9268541 chr6:32384527 BTNL2 [+9622bp] C - 12 T vs. C 0.05 (C) 0.142 (C) <1 (-) 0 (-) >0.05
rs9269048 chr6:32438792 HLA-DRA [+25969bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs28366191 chr6:32364190 BTNL2 C - 12 A vs. G 0.067 (G) 0.025 (G) >1 (-) 0 (-) >0.05
rs28732232 chr6:32427512 HLA-DRA [+14689bp] C - 11 T vs. C 0.192 (T) 0.033 (T) >1 (-) 61 (-) >0.05
rs117033414 chr6:32359769 BTNL2 [-1971bp] C - 5 T vs. C - 0.125 (C) >1 (-) 6 (-) >0.05
rs6912382 chr6:32389375 BTNL2 [+14470bp] C - 12 T vs. C 0.025 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs17202449 chr6:32363722 BTNL2 C - 12 A vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs115653843 chr6:32366132 BTNL2 C - 10 A vs. C - 0.142 (A) >1 (-) 0 (-) >0.05
rs116307898 chr6:32366097 BTNL2 C - 10 A vs. G - 0.142 (A) >1 (-) 0 (-) >0.05
rs76568958 chr6:32391422 HLA-DRA [-16197bp] C - 11 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs112079463 chr6:32391345 HLA-DRA [-16274bp] C - 11 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs117164228 chr6:32366070 BTNL2 C - 10 T vs. C - 0.142 (T) >1 (-) 0 (-) >0.05
rs1980493 chr6:32363215 BTNL2 C - 12 T vs. C 0.1 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs3129953 chr6:32361821 BTNL2 C - 12 T vs. C 0.1 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs116895751 chr6:32366039 BTNL2 C - 10 A vs. T - 0.158 (A) >1 (-) 0 (-) >0.05
rs3763308 chr6:32374640 BTNL2 C - 12 A vs. G 0.025 (A) - >1 (-) 26 (-) >0.05
rs3129959 chr6:32375796 BTNL2 [+891bp] C - 12 A vs. T 0.1 (T) - >1 (-) 4 (-) >0.05
rs118106395 chr6:32366022 BTNL2 C - 10 T vs. C - 0.15 (T) >1 (-) 0 (-) >0.05
rs28366193 chr6:32369323 BTNL2 C - 12 A vs. T 0.067 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs9268879 chr6:32431306 HLA-DRA [+18483bp] C - 12 T vs. G 0.15 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs117841740 chr6:32359952 BTNL2 [-1788bp] C - 5 A vs. C - 0.142 (C) >1 (-) 8 (-) >0.05
rs118154479 chr6:32365955 BTNL2 C - 10 A vs. T - 0.142 (T) <1 (-) 0 (-) >0.05
rs7747412 chr6:32373286 BTNL2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs28895159 chr6:32422714 HLA-DRA [+9891bp] C - 11 T vs. C 0.175 (C) - >1 (-) 59 (-) >0.05
rs28895158 chr6:32422708 HLA-DRA [+9885bp] C - 11 T vs. C 0.183 (C) - >1 (-) 59 (-) >0.05
rs2395158 chr6:32374595 BTNL2 C - 12 A vs. G 0.1 (G) 0.042 (G) >1 (-) 4 (-) >0.05
rs149545886 chr6:32362679 BTNL2 C - 5 A vs. G - - >1 (-) 28 (-) >0.05
rs117680060 chr6:32358956 BTNL2 [-2784bp] C - 6 A vs. G - 0.142 (A) <1 (-) 0 (-) >0.05
rs28895149 chr6:32422062 HLA-DRA [+9239bp] C - 11 A vs. G 0.108 (A) - >1 (-) 61 (-) >0.05
rs142707128 chr6:32422381 HLA-DRA [+9558bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs117643912 chr6:32359210 BTNL2 [-2530bp] C - 6 T vs. C - 0.15 (C) >1 (-) 0 (-) >0.05
rs7747521 chr6:32431105 HLA-DRA [+18282bp] C - 12 A vs. G 0.15 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs116712006 chr6:32389671 BTNL2 [+14766bp] C - 10 C vs. G - 0.075 (C) >1 (-) 0 (-) >0.05
rs4959100 chr6:32397813 HLA-DRA [-9806bp] C - 12 T vs. C 0.083 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs112819096 chr6:32390175 BTNL2 [+15270bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs17208797 chr6:32363335 BTNL2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs117859623 chr6:32402552 HLA-DRA [-5067bp] C - 11 A vs. G - 0.15 (A) >1 (-) 30 (-) >0.05

Association studies for this region [+]