HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9791337 chr6:32428500 HLA-DRA [+15677bp] C - 11 T vs. G 0.192 (T) 0.033 (T) >1 (-) 59 (-) >0.05
rs3129856 chr6:32399337 HLA-DRA [-8282bp] C - 12 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs117820904 chr6:32401706 HLA-DRA [-5913bp] C - 11 T vs. C - 0.058 (C) >1 (-) 15 (-) >0.05
rs3817970 chr6:32361239 BTNL2 [-501bp] C - 10 T vs. C - 0.15 (T) <1 (-) 6 (-) >0.05
rs60110771 chr6:32411286 HLA-DRA C - 11 T vs. C - 0.058 (T) >1 (-) 16 (-) >0.05
rs143947808 chr6:32402019 HLA-DRA [-5600bp] C - 11 C vs. G - - >1 (-) 15 (-) >0.05
rs3135386 chr6:32415426 HLA-DRA [+2603bp] C - 12 A vs. G 0.125 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs58103245 chr6:32395956 HLA-DRA [-11663bp] C - 11 T vs. C - 0.15 (T) <1 (-) 16 (-) >0.05
rs2395184 chr6:32432646 HLA-DRA [+19823bp] C - 7 A vs. G 0.125 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs28732209 chr6:32389543 BTNL2 [+14638bp] C - 12 A vs. C 0.067 (C) - >1 (-) 0 (-) >0.05
rs3117099 chr6:32358270 BTNL2 [-3470bp] C - 11 A vs. G 0.142 (A) 0.458 (A) <1 (-) 0 (-) >0.05
rs28895139 chr6:32421671 HLA-DRA [+8848bp] C - 11 A vs. G 0.158 (A) 0.017 (A) >1 (-) 55 (-) >0.05
rs9268498 chr6:32375431 BTNL2 [+526bp] C - 12 T vs. C 0.067 (C) 0.25 (C) >1 (-) 0 (-) >0.05
rs145590657 chr6:32426634 HLA-DRA [+13811bp] C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs3817971 chr6:32361133 BTNL2 [-607bp] C - 10 A vs. G - 0.15 (G) >1 (-) 7 (-) >0.05
rs117227499 chr6:32360472 BTNL2 [-1268bp] C - 6 A vs. G - 0.142 (A) >1 (-) 42 (-) >0.05
rs28895202 chr6:32425190 HLA-DRA [+12367bp] C - 11 T vs. C 0.108 (C) - <1 (-) 61 (-) >0.05
rs28895203 chr6:32425191 HLA-DRA [+12368bp] C - 11 A vs. G 0.108 (A) - >1 (-) 61 (-) >0.05
rs28732233 chr6:32427699 HLA-DRA [+14876bp] C - 6 T vs. C 0.033 (T) - <1 (-) 33 (-) >0.05
rs143767410 chr6:32398991 HLA-DRA [-8628bp] C - 10 A vs. G - - >1 (-) 3 (-) >0.05
rs9268886 chr6:32431828 HLA-DRA [+19005bp] C - 11 A vs. G 0.15 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs9268887 chr6:32431833 HLA-DRA [+19010bp] C - 11 C vs. G 0.15 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs9269045 chr6:32438715 HLA-DRA [+25892bp] C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs9268980 chr6:32435123 HLA-DRA [+22300bp] C - 3 A vs. G 0.133 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs9268981 chr6:32435131 HLA-DRA [+22308bp] C - 3 T vs. C 0.133 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs3129878 chr6:32408735 HLA-DRA C - 12 A vs. C 0.267 (C) 0.383 (C) <1 (-) 40 (-) >0.05
rs3129890 chr6:32414273 HLA-DRA [+1450bp] C - 12 T vs. C 0.15 (C) 0.325 (C) <1 (-) 2 (-) >0.05
rs57964717 chr6:32357782 BTNL2 [-3958bp] C - 10 T vs. G - 0.15 (T) <1 (-) 1 (-) >0.05
rs6911777 chr6:32409996 HLA-DRA C - 12 T vs. C 0.067 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs144354137 chr6:32401411 HLA-DRA [-6208bp] C - 10 C vs. G - - <1 (-) 3 (-) >0.05
rs16822618 chr6:32410087 HLA-DRA C - 12 T vs. C 0.067 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs3129843 chr6:32395726 HLA-DRA [-11893bp] C - 12 A vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs9268977 chr6:32434939 HLA-DRA [+22116bp] C - 3 T vs. C 0.133 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs9268510 chr6:32378503 BTNL2 [+3598bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9268973 chr6:32434778 HLA-DRA [+21955bp] C - 3 T vs. C 0.133 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs9268972 chr6:32434731 HLA-DRA [+21908bp] C - 3 A vs. T 0.133 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs9268976 chr6:32434874 HLA-DRA [+22051bp] C - 3 A vs. T 0.15 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs9268971 chr6:32434639 HLA-DRA [+21816bp] C - 3 A vs. G 0.15 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs2395188 chr6:32433256 HLA-DRA [+20433bp] C - 10 T vs. C 0.133 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs59526486 chr6:32380322 BTNL2 [+5417bp] C - 12 T vs. G - 0.15 (G) >1 (-) 0 (-) >0.05
rs9268966 chr6:32434262 HLA-DRA [+21439bp] C - 3 A vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs9268896 chr6:32431965 HLA-DRA [+19142bp] C - 5 A vs. G 0.15 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs9268895 chr6:32431962 HLA-DRA [+19139bp] C - 5 A vs. G 0.15 (G) 0.233 (G) >1 (-) 0 (-) >0.05
rs9268974 chr6:32434830 HLA-DRA [+22007bp] C - 3 T vs. C 0.133 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs9268975 chr6:32434844 HLA-DRA [+22021bp] C - 3 A vs. T 0.133 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs117808141 chr6:32360464 BTNL2 [-1276bp] C - 10 C vs. G - 0.142 (G) >1 (-) 16 (-) >0.05
rs9268813 chr6:32424594 HLA-DRA [+11771bp] C - 12 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs9269044 chr6:32438677 HLA-DRA [+25854bp] C - 3 A vs. G 0.142 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs9269046 chr6:32438741 HLA-DRA [+25918bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs9268987 chr6:32435423 HLA-DRA [+22600bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05

Association studies for this region [+]