HLA-DRA, chr6:32407619-32412823 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2395163 chr6:32387809 BTNL2 [+12904bp] All: C 103,235 14 C vs. T 0.283 (C) 0.1 (C) 0.87 (0.84-0.91) 0 (0-54) 5.00e-12
Meta_image?name=rs2395163

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7748825 chr6:32425914 HLA-DRA [+13091bp] C - 12 C vs. G 0.433 (C) 0.458 (G) <1 (-) 0 (-) <0.05
rs3817964 chr6:32367997 BTNL2 C - 11 A vs. T 0.108 (A) 0.067 (A) <1 (-) 0 (-) <0.05
rs9268814 chr6:32424616 HLA-DRA [+11793bp] C - 12 C vs. G 0.458 (G) 0.458 (C) >1 (-) 0 (-) <0.05
rs3117139 chr6:32364667 BTNL2 C - 12 A vs. G - - >1 (-) 57 (-) <0.05
rs28895054 chr6:32417167 HLA-DRA [+4344bp] All: C 103,235 14 A vs. G 0.142 (A) 0.017 (A) 1.09 (1.03-1.15) 59 (25-77) 0.002
rs9268804 chr6:32423355 HLA-DRA [+10532bp] C - 12 C vs. G 0.392 (G) 0.458 (C) >1 (-) 0 (-) <0.05
rs9268580 chr6:32396905 HLA-DRA [-10714bp] C - 12 C vs. G 0.4 (C) 0.45 (C) <1 (-) 0 (-) <0.05
rs9268807 chr6:32423915 HLA-DRA [+11092bp] C - 12 C vs. G 0.2 (C) 0.2 (C) >1 (-) 46 (-) <0.05
rs3135387 chr6:32415109 HLA-DRA [+2286bp] C - 12 T vs. G 0.225 (T) 0.158 (T) >1 (-) 53 (-) <0.05
rs6457589 chr6:32419961 HLA-DRA [+7138bp] C - 12 T vs. G 0.35 (T) 0.442 (T) >1 (-) 15 (-) <0.05
rs9268851 chr6:32429582 HLA-DRA [+16759bp] All: C 100,472 13 A vs. G 0.217 (A) 0.1 (A) 1.08 (1.03-1.13) 45 (0-71) 0.003
rs4412247 chr6:32386471 BTNL2 [+11566bp] C - 12 A vs. G - - >1 (-) 54 (-) <0.05
rs9268645 chr6:32408527 HLA-DRA C - 12 C vs. G 0.4 (G) 0.475 (C) >1 (-) 0 (-) <0.05
rs28895187 chr6:32424380 HLA-DRA [+11557bp] All: C 100,472 13 A vs. G 0.192 (A) 0.033 (A) 1.08 (1.03-1.14) 63 (32-79) 0.003
rs3129898 chr6:32422125 HLA-DRA [+9302bp] C - 12 A vs. G 0.2 (G) - <1 (-) 46 (-) <0.05
rs3117116 chr6:32367017 BTNL2 C - 12 A vs. G 0.192 (G) 0.125 (G) <1 (-) 58 (-) <0.05
rs3129895 chr6:32421227 HLA-DRA [+8404bp] C - 12 A vs. G 0.2 (A) 0.175 (A) >1 (-) 47 (-) <0.05
rs3129866 chr6:32404065 HLA-DRA [-3554bp] C - 10 C vs. G 0.333 (G) 0.317 (G) <1 (-) 51 (-) <0.05
rs28895172 chr6:32423058 HLA-DRA [+10235bp] All: C 100,472 13 A vs. G - - 0.93 (0.88-0.97) 62 (31-79) 0.003
rs3135384 chr6:32419959 HLA-DRA [+7136bp] C - 12 A vs. G 0.208 (A) 0.117 (A) >1 (-) 48 (-) <0.05
rs9268653 chr6:32409058 HLA-DRA C - 12 T vs. C - - >1 (-) 57 (-) <0.05
rs28732215 chr6:32408932 HLA-DRA All: C 103,235 14 G vs. A - - 0.89 (0.82-0.96) 45 (0-71) 0.003
rs28732206 chr6:32383335 BTNL2 [+8430bp] All: C 103,235 14 C vs. G 0.042 (C) - 1.13 (1.04-1.23) 43 (0-69) 0.004
rs9268588 chr6:32397794 HLA-DRA [-9825bp] C - 12 C vs. G 0.4 (G) 0.475 (C) >1 (-) 0 (-) <0.05
rs7756262 chr6:32398675 HLA-DRA [-8944bp] C - 12 A vs. T 0.4 (A) 0.475 (T) <1 (-) 0 (-) <0.05
rs9268615 chr6:32402889 HLA-DRA [-4730bp] C - 12 A vs. G 0.408 (A) 0.475 (G) <1 (-) 0 (-) <0.05
rs2187818 chr6:32395568 HLA-DRA [-12051bp] C - 12 T vs. G 0.4 (T) 0.45 (T) <1 (-) 0 (-) <0.05
rs151171873 chr6:32429485 HLA-DRA [+16662bp] C - 10 A vs. T - - <1 (-) 42 (-) <0.05
rs3129889 chr6:32413545 HLA-DRA [+722bp] C - 12 A vs. G 0.217 (G) 0.0 (G) <1 (-) 53 (-) <0.05
rs3135388 chr6:32413051 HLA-DRA [+228bp] C - 12 A vs. G 0.2 (A) 0.0 (A) >1 (-) 53 (-) <0.05
rs73397302 chr6:32431496 HLA-DRA [+18673bp] C - 9 A vs. T - - <1 (-) 46 (-) <0.05
rs3135352 chr6:32392906 HLA-DRA [-14713bp] C - 12 A vs. C 0.2 (C) - <1 (-) 55 (-) <0.05
rs3135350 chr6:32392981 HLA-DRA [-14638bp] C - 12 T vs. C 0.208 (C) 0.0 (C) <1 (-) 55 (-) <0.05
rs28732203 chr6:32362447 BTNL2 All: C 103,235 14 T vs. C 0.042 (T) - 1.13 (1.04-1.22) 46 (0-71) 0.005
rs6926611 chr6:32386433 BTNL2 [+11528bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs9501620 chr6:32383027 BTNL2 [+8122bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs4577793 chr6:32422722 HLA-DRA [+9899bp] C - 12 T vs. C 0.358 (T) 0.425 (T) >1 (-) 16 (-) <0.05
rs143884736 chr6:32429132 HLA-DRA [+16309bp] C - 10 T vs. G - - >1 (-) 41 (-) <0.05
rs3135377 chr6:32385399 BTNL2 [+10494bp] C - 12 A vs. G 0.267 (A) 0.008 (A) >1 (-) 45 (-) <0.05
rs2395165 chr6:32388144 BTNL2 [+13239bp] C - 12 T vs. C 0.267 (C) 0.008 (C) <1 (-) 44 (-) <0.05
rs3135391 chr6:32410987 HLA-DRA C - 12 A vs. G 0.2 (A) 0.0 (A) >1 (-) 56 (-) <0.05
rs17208923 chr6:32380232 BTNL2 [+5327bp] C - 12 T vs. C 0.008 (T) - >1 (-) 17 (-) <0.05
rs62404580 chr6:32377860 BTNL2 [+2955bp] C - 12 T vs. C - - >1 (-) 59 (-) <0.05
rs968155 chr6:32380715 BTNL2 [+5810bp] C - 12 T vs. C 0.45 (C) 0.317 (C) <1 (-) 58 (-) <0.05
rs111652687 chr6:32431229 HLA-DRA [+18406bp] C - 9 T vs. C 0.008 (C) - <1 (-) 38 (-) <0.05
rs3763323 chr6:32406843 HLA-DRA [-776bp] C - 12 T vs. C - - <1 (-) 58 (-) <0.05
rs3129868 chr6:32404377 HLA-DRA [-3242bp] C - 12 A vs. C 0.2 (A) 0.133 (A) >1 (-) 59 (-) <0.05
rs142406849 chr6:32425293 HLA-DRA [+12470bp] C - 10 T vs. C - - <1 (-) 42 (-) <0.05
rs9268635 chr6:32406579 HLA-DRA [-1040bp] C - 12 T vs. C 0.2 (T) 0.0 (T) >1 (-) 58 (-) <0.05
rs9461744 chr6:32388317 BTNL2 [+13412bp] C - 12 A vs. G 0.008 (G) 0.108 (G) <1 (-) 0 (-) <0.05

Association studies for this region [+]