HSPA12B, chr20:3713314-3733758 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8124665 chr20:3666952 SIGLEC1 [-665bp] C - 10 A vs. G 0.017 (G) 0.125 (G) >1 (-) 26 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8124665 chr20:3666952 SIGLEC1 [-665bp] C - 10 A vs. G 0.017 (G) 0.125 (G) >1 (-) 26 (-) <0.05
rs148479471 chr20:3714769 HSPA12B C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs555045 chr20:3712338 HSPA12B [-976bp] C - 12 T vs. C 0.358 (T) 0.4 (T) <1 (-) 0 (-) <0.05
rs735294 chr20:3684960 SIGLEC1 C - 13 T vs. C 0.125 (C) 0.275 (C) >1 (-) 0 (-) <0.05
rs6139180 chr20:3681283 SIGLEC1 C - 13 A vs. G 0.125 (G) 0.275 (G) >1 (-) 0 (-) <0.05
rs73608192 chr20:3693564 SIGLEC1 [+5789bp] C - 11 C vs. G 0.058 (C) 0.125 (C) >1 (-) 0 (-) <0.05
rs60858447 chr20:3732225 HSPA12B C - 12 A vs. G - 0.083 (A) >1 (-) 3 (-) >0.05
rs73080468 chr20:3732967 HSPA12B C - 12 A vs. G 0.017 (A) - >1 (-) 18 (-) >0.05
rs4349409 chr20:3690332 SIGLEC1 [+2557bp] C - 13 A vs. C 0.333 (C) 0.175 (C) <1 (-) 9 (-) >0.05
rs73078430 chr20:3682657 SIGLEC1 C - 13 A vs. G 0.042 (A) - >1 (-) 21 (-) >0.05
rs35702208 chr20:3672123 SIGLEC1 C - 10 A vs. G - - >1 (-) 29 (-) >0.05
rs34924243 chr20:3682126 SIGLEC1 C - 13 T vs. C 0.042 (T) - >1 (-) 21 (-) >0.05
rs6084436 chr20:3667081 SIGLEC1 [-536bp] C - 12 T vs. C 0.067 (T) - >1 (-) 40 (-) >0.05
rs6116007 chr20:3714080 HSPA12B C - 13 C vs. G 0.258 (G) 0.475 (G) >1 (-) 0 (-) >0.05
rs111969446 chr20:3672240 SIGLEC1 C - 13 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
chr20:3754107 chr20:3754107 SPEF1 [-4044bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs75744682 chr20:3717813 HSPA12B C - 13 A vs. C 0.175 (A) - <1 (-) 25 (-) >0.05
rs76576225 chr20:3731009 HSPA12B C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs670863 chr20:3737974 C20orf27 C - 12 A vs. T 0.075 (A) 0.175 (A) <1 (-) 33 (-) >0.05
rs4608598 chr20:3694084 SIGLEC1 [+6309bp] C - 13 A vs. G - - >1 (-) 20 (-) >0.05
rs659076 chr20:3726980 HSPA12B C - 11 T vs. C - - >1 (-) 22 (-) >0.05
rs6052033 chr20:3699308 SIGLEC1 [+11533bp] C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs112810540 chr20:3703553 HSPA12B [-9761bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs142796686 chr20:3712273 HSPA12B [-1041bp] C - 11 A vs. G - - <1 (-) 4 (-) >0.05
rs147677537 chr20:3702320 HSPA12B [-10994bp] C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs6037658 chr20:3709493 HSPA12B [-3821bp] C - 13 A vs. C 0.433 (A) 0.392 (A) <1 (-) 0 (-) >0.05
rs4505601 chr20:3694108 SIGLEC1 [+6333bp] C - 13 A vs. G 0.25 (A) 0.125 (A) >1 (-) 29 (-) >0.05
rs55730531 chr20:3697960 SIGLEC1 [+10185bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4815599 chr20:3703605 HSPA12B [-9709bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs150590139 chr20:3715090 HSPA12B C - 8 C vs. G - - >1 (-) 35 (-) >0.05
rs6084444 chr20:3691584 SIGLEC1 [+3809bp] C - 13 A vs. G 0.242 (G) 0.15 (G) <1 (-) 34 (-) >0.05
rs4287834 chr20:3707439 HSPA12B [-5875bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6084441 chr20:3686070 SIGLEC1 C - 13 T vs. C 0.275 (T) 0.125 (T) >1 (-) 49 (-) >0.05
rs13039318 chr20:3737232 C20orf27 C - 13 C vs. G 0.242 (C) 0.192 (C) >1 (-) 23 (-) >0.05
rs6116024 chr20:3744119 C20orf27 C - 12 C vs. G - - >1 (-) 4 (-) >0.05
rs114255702 chr20:3739925 C20orf27 C - 12 A vs. G 0.033 (A) - >1 (-) 36 (-) >0.05
rs6116008 chr20:3715219 HSPA12B C - 13 T vs. C 0.233 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs658495 chr20:3737495 C20orf27 C - 12 A vs. G 0.058 (G) 0.15 (G) >1 (-) 16 (-) >0.05
rs2326250 chr20:3703000 HSPA12B [-10314bp] C - 13 T vs. C 0.45 (T) 0.4 (T) <1 (-) 0 (-) >0.05
rs11087600 chr20:3682372 SIGLEC1 C - 13 T vs. C 0.283 (T) 0.2 (T) >1 (-) 46 (-) >0.05
rs115074909 chr20:3739868 C20orf27 C - 12 A vs. G 0.042 (A) - >1 (-) 36 (-) >0.05
rs3827077 chr20:3721456 HSPA12B C - 13 T vs. C 0.233 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs13037869 chr20:3682149 SIGLEC1 C - 13 A vs. G 0.283 (A) 0.2 (A) >1 (-) 44 (-) >0.05
rs114816360 chr20:3746898 C20orf27 C - 12 A vs. G - - >1 (-) 34 (-) >0.05
rs73588709 chr20:3748696 C20orf27 C - 12 T vs. G 0.008 (G) - <1 (-) 33 (-) >0.05
rs74876739 chr20:3742952 C20orf27 C - 12 T vs. C 0.033 (T) - >1 (-) 35 (-) >0.05
rs862832 chr20:3720701 HSPA12B C - 12 T vs. C 0.15 (T) 0.192 (T) >1 (-) 10 (-) >0.05
rs6107337 chr20:3717101 HSPA12B C - 13 T vs. G 0.225 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs516681 chr20:3730208 HSPA12B C - 12 C vs. G 0.067 (G) 0.0 (G) >1 (-) 37 (-) >0.05
rs7263781 chr20:3713940 HSPA12B C - 12 C vs. G 0.017 (C) 0.175 (C) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.