SPEF1, chr20:3758151-3762095 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs148479471 chr20:3714769 HSPA12B C - 12 T vs. C - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs148479471 chr20:3714769 HSPA12B C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs555045 chr20:3712338 HSPA12B [-976bp] C - 12 T vs. C 0.358 (T) 0.4 (T) <1 (-) 0 (-) <0.05
rs60858447 chr20:3732225 HSPA12B C - 12 A vs. G - 0.083 (A) >1 (-) 3 (-) >0.05
rs73080468 chr20:3732967 HSPA12B C - 12 A vs. G 0.017 (A) - >1 (-) 18 (-) >0.05
rs6116007 chr20:3714080 HSPA12B C - 13 C vs. G 0.258 (G) 0.475 (G) >1 (-) 0 (-) >0.05
chr20:3754107 chr20:3754107 SPEF1 [-4044bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs75744682 chr20:3717813 HSPA12B C - 13 A vs. C 0.175 (A) - <1 (-) 25 (-) >0.05
rs76576225 chr20:3731009 HSPA12B C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs670863 chr20:3737974 C20orf27 C - 12 A vs. T 0.075 (A) 0.175 (A) <1 (-) 33 (-) >0.05
rs659076 chr20:3726980 HSPA12B C - 11 T vs. C - - >1 (-) 22 (-) >0.05
rs142796686 chr20:3712273 HSPA12B [-1041bp] C - 11 A vs. G - - <1 (-) 4 (-) >0.05
rs6037658 chr20:3709493 HSPA12B [-3821bp] C - 13 A vs. C 0.433 (A) 0.392 (A) <1 (-) 0 (-) >0.05
rs150590139 chr20:3715090 HSPA12B C - 8 C vs. G - - >1 (-) 35 (-) >0.05
rs13039318 chr20:3737232 C20orf27 C - 13 C vs. G 0.242 (C) 0.192 (C) >1 (-) 23 (-) >0.05
rs6116024 chr20:3744119 C20orf27 C - 12 C vs. G - - >1 (-) 4 (-) >0.05
rs114255702 chr20:3739925 C20orf27 C - 12 A vs. G 0.033 (A) - >1 (-) 36 (-) >0.05
rs6116008 chr20:3715219 HSPA12B C - 13 T vs. C 0.233 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs658495 chr20:3737495 C20orf27 C - 12 A vs. G 0.058 (G) 0.15 (G) >1 (-) 16 (-) >0.05
rs2295348 chr20:3785034 CDC25B C - 13 A vs. G 0.267 (A) 0.142 (A) >1 (-) 18 (-) >0.05
rs3892889 chr20:3800963 AP5S1 [-215bp] C - 13 C vs. G - 0.292 (C) <1 (-) 0 (-) >0.05
rs115074909 chr20:3739868 C20orf27 C - 12 A vs. G 0.042 (A) - >1 (-) 36 (-) >0.05
rs3827077 chr20:3721456 HSPA12B C - 13 T vs. C 0.233 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs114816360 chr20:3746898 C20orf27 C - 12 A vs. G - - >1 (-) 34 (-) >0.05
rs73588709 chr20:3748696 C20orf27 C - 12 T vs. G 0.008 (G) - <1 (-) 33 (-) >0.05
rs74876739 chr20:3742952 C20orf27 C - 12 T vs. C 0.033 (T) - >1 (-) 35 (-) >0.05
rs862832 chr20:3720701 HSPA12B C - 12 T vs. C 0.15 (T) 0.192 (T) >1 (-) 10 (-) >0.05
rs6107337 chr20:3717101 HSPA12B C - 13 T vs. G 0.225 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs516681 chr20:3730208 HSPA12B C - 12 C vs. G 0.067 (G) 0.0 (G) >1 (-) 37 (-) >0.05
rs115222704 chr20:3784746 CDC25B C - 13 A vs. G 0.017 (A) - >1 (-) 34 (-) >0.05
rs7263781 chr20:3713940 HSPA12B C - 12 C vs. G 0.017 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs77889744 chr20:3750054 C20orf27 [+1020bp] C - 12 C vs. G 0.025 (G) - <1 (-) 30 (-) >0.05
rs484597 chr20:3740874 C20orf27 C - 12 T vs. C 0.375 (T) 0.275 (T) <1 (-) 1 (-) >0.05
rs78012956 chr20:3724123 HSPA12B C - 13 T vs. C 0.233 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs41279388 chr20:3726687 HSPA12B C - 13 A vs. G 0.133 (A) 0.142 (A) <1 (-) 0 (-) >0.05
rs880278 chr20:3740079 C20orf27 C - 12 A vs. G 0.025 (A) 0.067 (A) >1 (-) 36 (-) >0.05
rs112311490 chr20:3746887 C20orf27 C - 5 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs6139190 chr20:3723581 HSPA12B C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6116026 chr20:3745127 C20orf27 C - 12 A vs. G 0.183 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs11697735 chr20:3709225 HSPA12B [-4089bp] C - 13 A vs. G 0.283 (A) - >1 (-) 16 (-) >0.05
rs6139191 chr20:3724708 HSPA12B C - 13 A vs. G 0.233 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs3516 chr20:3786681 CDC25B C - 13 T vs. C 0.025 (C) 0.033 (C) <1 (-) 38 (-) >0.05
rs580502 chr20:3711864 HSPA12B [-1450bp] C - 12 A vs. C 0.233 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs6116022 chr20:3742874 C20orf27 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs490152 chr20:3746863 C20orf27 C - 12 C vs. G 0.392 (G) 0.217 (G) >1 (-) 0 (-) >0.05
rs62206555 chr20:3730524 HSPA12B C - 13 A vs. G 0.325 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs11569988 chr20:3779234 CDC25B C - 13 T vs. C - - >1 (-) 32 (-) >0.05
rs6052090 chr20:3795615 AP5S1 [-5563bp] C - 13 T vs. C 0.025 (T) 0.242 (T) <1 (-) 0 (-) >0.05
rs66808605 chr20:3790302 CDC25B [+3540bp] C - 13 T vs. C 0.292 (T) 0.167 (T) <1 (-) 8 (-) >0.05
rs6139200 chr20:3743723 C20orf27 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2228465 chr20:3782702 CDC25B C - 13 A vs. G - - >1 (-) 33 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.