HSPA12B, chr20:3713314-3733758 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8124665 chr20:3666952 SIGLEC1 [-665bp] C - 10 A vs. G 0.017 (G) 0.125 (G) >1 (-) 26 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs142626672 chr20:3701523 HSPA12B [-11791bp] C - 12 A vs. G - - >1 (-) 44 (-) >0.05
rs148390111 chr20:3696749 SIGLEC1 [+8974bp] C - 10 A vs. G - - >1 (-) 8 (-) >0.05
rs78478491 chr20:3762230 SPEF1 [+135bp] C - 13 A vs. C 0.075 (C) - <1 (-) 0 (-) >0.05
rs674110 chr20:3728026 HSPA12B C - 12 T vs. C 0.067 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs629747 chr20:3718467 HSPA12B C - 12 T vs. C - - >1 (-) 14 (-) >0.05
rs111782874 chr20:3762997 SPEF1 [+902bp] C - 13 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs671650 chr20:3669165 SIGLEC1 C - 13 T vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs150622725 chr20:3692345 SIGLEC1 [+4570bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs75113016 chr20:3747847 C20orf27 C - 13 A vs. T 0.075 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs74316544 chr20:3763696 CENPB [-802bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs625372 chr20:3684729 SIGLEC1 C - 13 T vs. C 0.458 (T) 0.367 (T) <1 (-) 39 (-) >0.05
rs3088007 chr20:3733487 HSPA12B C - 13 T vs. G 0.367 (T) 0.242 (T) <1 (-) 0 (-) >0.05
rs539050 chr20:3748962 C20orf27 C - 13 T vs. C 0.442 (T) 0.275 (C) >1 (-) 0 (-) >0.05
rs6133057 chr20:3696692 SIGLEC1 [+8917bp] C - 13 T vs. C 0.158 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs832312 chr20:3723402 HSPA12B C - 12 A vs. T 0.075 (A) - <1 (-) 9 (-) >0.05
rs57102475 chr20:3772434 CDC25B C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs1018492 chr20:3682275 SIGLEC1 C - 13 A vs. G 0.483 (G) 0.383 (A) <1 (-) 15 (-) >0.05
rs601081 chr20:3664805 ADAM33 [+1912bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs3810564 chr20:3688147 SIGLEC1 [+372bp] C - 9 A vs. C - 0.175 (C) >1 (-) 0 (-) >0.05
rs17701662 chr20:3670512 SIGLEC1 C - 13 A vs. T 0.05 (T) - >1 (-) 0 (-) >0.05
rs79793204 chr20:3722733 HSPA12B C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs74553328 chr20:3685032 SIGLEC1 C - 12 T vs. C 0.025 (T) - >1 (-) 50 (-) >0.05
rs78080229 chr20:3762658 SPEF1 [+563bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs611847 chr20:3684022 SIGLEC1 C - 13 A vs. G 0.45 (A) 0.358 (A) <1 (-) 38 (-) >0.05
rs12625778 chr20:3708995 HSPA12B [-4319bp] C - 13 A vs. C 0.075 (C) 0.167 (C) >1 (-) 21 (-) >0.05
rs73080437 chr20:3708218 HSPA12B [-5096bp] C - 13 T vs. G 0.075 (G) 0.167 (G) >1 (-) 21 (-) >0.05
rs78571056 chr20:3762653 SPEF1 [+558bp] C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs1018493 chr20:3682011 SIGLEC1 C - 13 A vs. G 0.492 (A) 0.383 (G) >1 (-) 14 (-) >0.05
rs117435358 chr20:3693913 SIGLEC1 [+6138bp] C - 13 T vs. C 0.042 (T) - <1 (-) 10 (-) >0.05
rs4813636 chr20:3681708 SIGLEC1 C - 13 A vs. G 0.492 (A) 0.383 (G) >1 (-) 14 (-) >0.05
rs45611736 chr20:3672389 SIGLEC1 C - 13 T vs. G 0.067 (G) 0.108 (G) >1 (-) 0 (-) >0.05
rs910652 chr20:3727970 HSPA12B C - 13 T vs. C 0.408 (C) 0.25 (C) >1 (-) 25 (-) >0.05
rs62206552 chr20:3712994 HSPA12B [-320bp] C - 12 T vs. C 0.242 (C) 0.267 (C) <1 (-) 1 (-) >0.05
rs4813639 chr20:3688853 SIGLEC1 [+1078bp] C - 13 A vs. G 0.067 (G) 0.175 (G) >1 (-) 5 (-) >0.05
rs76788623 chr20:3686307 SIGLEC1 C - 12 A vs. G 0.025 (A) - >1 (-) 50 (-) >0.05
rs117026083 chr20:3672323 SIGLEC1 C - 13 C vs. G 0.058 (C) - <1 (-) 0 (-) >0.05
rs8122358 chr20:3686979 SIGLEC1 C - 12 T vs. C 0.025 (T) - >1 (-) 50 (-) >0.05
rs12624922 chr20:3680280 SIGLEC1 C - 13 A vs. G 0.067 (G) 0.15 (G) >1 (-) 0 (-) >0.05
rs12624921 chr20:3680259 SIGLEC1 C - 13 A vs. G 0.075 (G) 0.158 (G) >1 (-) 0 (-) >0.05
rs535964 chr20:3666486 SIGLEC1 [-1131bp] C - 13 A vs. G 0.467 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs2474437 chr20:3731622 HSPA12B C - 13 T vs. C 0.25 (T) 0.283 (T) >1 (-) 8 (-) >0.05
rs41297628 chr20:3678792 SIGLEC1 C - 13 A vs. C 0.067 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs41304810 chr20:3678992 SIGLEC1 C - 13 T vs. C 0.067 (T) 0.15 (T) <1 (-) 14 (-) >0.05
rs76500013 chr20:3678841 SIGLEC1 C - 13 T vs. G 0.067 (T) 0.15 (T) <1 (-) 14 (-) >0.05
rs6052016 chr20:3680518 SIGLEC1 C - 13 T vs. C - - >1 (-) 12 (-) >0.05
rs1005885 chr20:3684426 SIGLEC1 C - 13 T vs. C 0.067 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs45495794 chr20:3734167 C20orf27 C - 12 T vs. C 0.067 (C) - >1 (-) 0 (-) >0.05
rs2281478 chr20:3759528 SPEF1 C - 13 T vs. C 0.5 (T) 0.358 (C) >1 (-) 0 (-) >0.05
rs8114815 chr20:3757520 SPEF1 [-631bp] C - 13 T vs. C 0.25 (C) 0.325 (C) >1 (-) 11 (-) >0.05
rs554799 chr20:3718997 HSPA12B C - 13 A vs. G 0.325 (A) 0.325 (A) >1 (-) 35 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.