LRRC25, chr19:18501954-18508427 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2303693 chr19:18557673 ELL All: C 108,990 15 T vs. C 0.167 (T) 0.058 (T) 0.91 (0.86-0.95) 0 (0-31) 7.09e-05
Meta_image?name=rs2303693

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2303693 chr19:18557673 ELL All: C 108,990 15 T vs. C 0.167 (T) 0.058 (T) 0.91 (0.86-0.95) 0 (0-31) 7.09e-05
rs113465793 chr19:18556417 ELL All: C 108,990 15 C vs. A 0.183 (C) 0.042 (C) 0.91 (0.87-0.95) 0 (0-38) 7.76e-05
rs146804507 chr19:18524170 SSBP4 [-5504bp] C - 3 A vs. G - - >1 (-) 0 (-) <0.05
rs78230247 chr19:18550121 ISYNA1 [+1010bp] C - 12 A vs. G - - >1 (-) 33 (-) <0.05
rs10424080 chr19:18518778 LRRC25 [+10351bp] C - 13 T vs. C 0.242 (T) 0.117 (T) >1 (-) 8 (-) <0.05
rs78612005 chr19:18554561 ELL C - 10 C vs. G 0.042 (G) - >1 (-) 4 (-) <0.05
rs74701207 chr19:18551039 ISYNA1 [+1928bp] C - 13 T vs. C 0.2 (C) 0.058 (C) >1 (-) 0 (-) <0.05
rs117419635 chr19:18535494 SSBP4 C - 10 A vs. G 0.033 (G) - >1 (-) 0 (-) <0.05
rs13344313 chr19:18517767 LRRC25 [+9340bp] C - 13 A vs. G 0.242 (A) 0.1 (A) >1 (-) 14 (-) <0.05
rs12971295 chr19:18517331 LRRC25 [+8904bp] C - 13 A vs. G - - >1 (-) 14 (-) <0.05
rs9749546 chr19:18518216 LRRC25 [+9789bp] C - 13 A vs. C 0.242 (C) 0.117 (C) <1 (-) 15 (-) <0.05
rs10421074 chr19:18516210 LRRC25 [+7783bp] C - 13 T vs. C 0.233 (T) 0.117 (T) >1 (-) 12 (-) <0.05
rs76517609 chr19:18545411 ISYNA1 C - 5 A vs. T - - >1 (-) 15 (-) >0.05
rs147838337 chr19:18542996 SSBP4 C - 4 A vs. G - - >1 (-) 12 (-) >0.05
rs79557920 chr19:18528362 SSBP4 [-1312bp] C - 13 A vs. G 0.183 (A) - <1 (-) 0 (-) >0.05
rs75581575 chr19:18528247 SSBP4 [-1427bp] C - 13 A vs. C 0.183 (C) - >1 (-) 0 (-) >0.05
rs77488050 chr19:18525298 SSBP4 [-4376bp] C - 13 T vs. C 0.192 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs8102195 chr19:18527110 SSBP4 [-2564bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs79355165 chr19:18522031 SSBP4 [-7643bp] C - 13 A vs. G 0.192 (G) 0.075 (G) >1 (-) 0 (-) >0.05
rs111408331 chr19:18514714 LRRC25 [+6287bp] C - 10 A vs. G 0.017 (A) - >1 (-) 12 (-) >0.05
rs34666550 chr19:18502861 LRRC25 C - 11 T vs. C 0.033 (T) - >1 (-) 55 (-) >0.05
rs116875009 chr19:18550559 ISYNA1 [+1448bp] C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs4808800 chr19:18517958 LRRC25 [+9531bp] C - 12 A vs. G 0.35 (G) 0.117 (G) <1 (-) 28 (-) >0.05
rs60164552 chr19:18488285 GDF15 C - 6 C vs. G - - >1 (-) 59 (-) >0.05
rs1002640 chr19:18512575 LRRC25 [+4148bp] C - 13 A vs. G 0.2 (A) 0.108 (A) >1 (-) 0 (-) >0.05
rs8112969 chr19:18513417 LRRC25 [+4990bp] C - 13 T vs. C 0.175 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs2888142 chr19:18510767 LRRC25 [+2340bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11086108 chr19:18511224 LRRC25 [+2797bp] C - 13 T vs. C 0.192 (C) - <1 (-) 0 (-) >0.05
rs11671540 chr19:18512157 LRRC25 [+3730bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs142744146 chr19:18531643 SSBP4 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs13382142 chr19:18516196 LRRC25 [+7769bp] C - 12 T vs. C 0.158 (T) 0.083 (T) >1 (-) 41 (-) >0.05
rs149542120 chr19:18555273 ELL C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs8106931 chr19:18506666 LRRC25 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs10403002 chr19:18519464 SSBP4 [-10210bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs146054484 chr19:18493953 GDF15 C - 7 A vs. C - - >1 (-) 0 (-) >0.05
rs141689496 chr19:18522682 SSBP4 [-6992bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs8101976 chr19:18519128 SSBP4 [-10546bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs12979706 chr19:18495424 GDF15 C - 12 A vs. G 0.142 (A) - <1 (-) 9 (-) >0.05
rs7254789 chr19:18503019 LRRC25 C - 12 T vs. C 0.158 (C) - >1 (-) 10 (-) >0.05
rs6413435 chr19:18497137 GDF15 C - 12 A vs. G 0.158 (A) - <1 (-) 8 (-) >0.05
rs146852393 chr19:18511744 LRRC25 [+3317bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs8101249 chr19:18501830 LRRC25 [-124bp] C - 12 A vs. C 0.158 (C) - >1 (-) 11 (-) >0.05
rs1059022 chr19:18499151 GDF15 C - 12 T vs. C 0.158 (T) - <1 (-) 10 (-) >0.05
rs142614315 chr19:18516117 LRRC25 [+7690bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs3787023 chr19:18498246 GDF15 C - 13 A vs. G 0.467 (A) 0.383 (G) >1 (-) 48 (-) >0.05
rs1055150 chr19:18499784 GDF15 C - 13 C vs. G 0.467 (G) 0.308 (C) <1 (-) 48 (-) >0.05
rs73523074 chr19:18539238 SSBP4 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs61743938 chr19:18547264 ISYNA1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs58410315 chr19:18554377 ELL C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs112025203 chr19:18554785 ELL C - 12 C vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]