MICA, chr6:31371356-31383092 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9266630 chr6:31346869 RNU6-283P [+8852bp] All: C 103,235 14 A vs. C 0.258 (A) 0.2 (A) 1.09 (1.05-1.13) 10 (0-49) 1.25e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2596426 chr6:31334264 RNU6-283P [-3647bp] C - 10 T vs. C 0.192 (T) - >1 (-) 20 (-) <0.05
rs2523537 chr6:31335707 RNU6-283P [-2204bp] C - 10 A vs. G 0.192 (A) 0.05 (A) >1 (-) 20 (-) <0.05
rs2523545 chr6:31333499 RNU6-283P [-4412bp] C - 12 A vs. G 0.425 (G) 0.108 (G) <1 (-) 50 (-) <0.05
rs2853991 chr6:31336812 RNU6-283P [-1099bp] C - 10 A vs. G 0.2 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs2250292 chr6:31330334 HLA-B [+5369bp] C - 12 A vs. T 0.475 (A) 0.483 (T) <1 (-) 0 (-) <0.05
rs9266634 chr6:31346978 RNU6-283P [+8961bp] C - 12 A vs. T 0.433 (A) 0.383 (A) >1 (-) 0 (-) <0.05
rs9266438 chr6:31337760 RNU6-283P [-151bp] C - 10 T vs. C 0.192 (C) 0.067 (C) <1 (-) 21 (-) <0.05
rs9266450 chr6:31338168 RNU6-283P [+151bp] C - 10 T vs. C 0.225 (T) - >1 (-) 20 (-) <0.05
rs9266441 chr6:31337816 RNU6-283P [-95bp] C - 10 A vs. G 0.2 (A) 0.075 (A) >1 (-) 21 (-) <0.05
rs9266457 chr6:31338612 RNU6-283P [+595bp] C - 10 T vs. C - - <1 (-) 23 (-) <0.05
rs9266518 chr6:31341485 RNU6-283P [+3468bp] C - 9 T vs. G 0.225 (T) - >1 (-) 2 (-) <0.05
rs9266459 chr6:31338645 RNU6-283P [+628bp] C - 10 A vs. G 0.192 (G) 0.092 (G) <1 (-) 17 (-) <0.05
rs2442738 chr6:31346414 RNU6-283P [+8397bp] All: C 103,235 14 A vs. G 0.192 (A) 0.117 (A) 1.06 (1.01-1.10) 28 (0-62) 0.010
rs2596438 chr6:31339871 RNU6-283P [+1854bp] C - 10 A vs. G 0.192 (G) 0.083 (G) <1 (-) 25 (-) <0.05
rs2507988 chr6:31339294 RNU6-283P [+1277bp] C - 10 A vs. T - - >1 (-) 23 (-) <0.05
rs2596437 chr6:31339086 RNU6-283P [+1069bp] C - 10 A vs. G 0.2 (G) - <1 (-) 24 (-) <0.05
rs2523518 chr6:31341128 RNU6-283P [+3111bp] C - 10 T vs. G 0.2 (T) 0.092 (T) >1 (-) 24 (-) <0.05
rs9266479 chr6:31339420 RNU6-283P [+1403bp] C - 10 T vs. G 0.2 (T) - >1 (-) 23 (-) <0.05
rs2596434 chr6:31338761 RNU6-283P [+744bp] C - 10 A vs. G 0.225 (G) - <1 (-) 25 (-) <0.05
rs2844585 chr6:31321360 HLA-B [-289bp] C - 8 A vs. G 0.208 (A) 0.067 (A) >1 (-) 26 (-) <0.05
rs9266513 chr6:31341296 RNU6-283P [+3279bp] C - 10 A vs. G 0.192 (A) 0.083 (A) >1 (-) 25 (-) <0.05
rs2516450 chr6:31387157 MICA [+4065bp] C - 11 T vs. C 0.183 (C) 0.042 (C) <1 (-) 31 (-) <0.05
rs3093971 chr6:31424607 MICB [-38051bp] C - 12 A vs. G 0.05 (A) 0.242 (A) <1 (-) 0 (-) <0.05
rs2523579 chr6:31328517 HLA-B [+3552bp] C - 9 T vs. C 0.375 (T) 0.25 (T) >1 (-) 0 (-) <0.05
rs2523684 chr6:31426399 MICB [-36259bp] C - 11 A vs. G 0.05 (G) 0.15 (G) >1 (-) 0 (-) <0.05
rs2853988 chr6:31337170 RNU6-283P [-741bp] C - 12 A vs. T 0.475 (T) 0.458 (T) <1 (-) 0 (-) <0.05
rs2253907 chr6:31336870 RNU6-283P [-1041bp] C - 12 T vs. C - - <1 (-) 0 (-) <0.05
rs2518030 chr6:31431082 MICB [-31576bp] C - 12 A vs. G 0.192 (A) 0.192 (A) >1 (-) 39 (-) <0.05
rs2523586 chr6:31327435 HLA-B [+2470bp] C - 7 T vs. G 0.3 (G) 0.15 (G) <1 (-) 0 (-) <0.05
rs2523638 chr6:31344273 RNU6-283P [+6256bp] C - 12 T vs. C 0.458 (T) 0.425 (T) >1 (-) 0 (-) <0.05
rs2523490 chr6:31348779 RNU6-283P [+10762bp] C - 12 A vs. T 0.292 (A) 0.108 (A) >1 (-) 23 (-) <0.05
rs2905720 chr6:31344388 RNU6-283P [+6371bp] C - 12 C vs. G 0.367 (C) 0.392 (C) >1 (-) 0 (-) <0.05
rs2844552 chr6:31342741 RNU6-283P [+4724bp] C - 12 A vs. G 0.45 (G) 0.45 (G) <1 (-) 0 (-) <0.05
rs2523634 chr6:31344876 RNU6-283P [+6859bp] C - 12 A vs. G 0.442 (A) 0.433 (A) >1 (-) 0 (-) <0.05
rs34682804 chr6:31428013 MICB [-34645bp] C - 12 T vs. C - 0.058 (T) >1 (-) 0 (-) <0.05
rs3997983 chr6:31344471 RNU6-283P [+6454bp] C - 12 C vs. G 0.442 (C) 0.4 (C) >1 (-) 0 (-) <0.05
rs112457099 chr6:31362698 MICA [-8658bp] C - 8 T vs. G 0.075 (T) - <1 (-) 0 (-) <0.05
rs10947210 chr6:31417742 MICA [+34650bp] C - 11 T vs. C 0.058 (C) 0.15 (C) >1 (-) 0 (-) <0.05
rs2428484 chr6:31355813 MICA [-15543bp] C - 5 C vs. G 0.033 (G) 0.05 (G) >1 (-) 0 (-) <0.05
rs9266267 chr6:31326027 HLA-B [+1062bp] C - 4 A vs. C 0.092 (C) 0.125 (C) <1 (-) 0 (-) <0.05
rs3094597 chr6:31350538 RNU6-283P [+12521bp] C - 12 A vs. G 0.3 (A) 0.108 (A) >1 (-) 23 (-) <0.05
rs34265426 chr6:31325684 HLA-B [+719bp] C - 5 A vs. C 0.067 (A) 0.167 (A) <1 (-) 0 (-) <0.05
rs9266264 chr6:31325947 HLA-B [+982bp] C - 4 A vs. C 0.075 (C) 0.15 (C) <1 (-) 0 (-) <0.05
rs2524279 chr6:31392906 MICA [+9814bp] C - 11 A vs. G 0.058 (G) 0.15 (G) >1 (-) 0 (-) <0.05
rs1523 chr6:31350755 RNU6-283P [+12738bp] C - 12 A vs. C 0.292 (C) 0.108 (C) <1 (-) 24 (-) <0.05
rs13199927 chr6:31328441 HLA-B [+3476bp] C - 5 T vs. G 0.075 (G) - <1 (-) 37 (-) <0.05
rs13214452 chr6:31328460 HLA-B [+3495bp] C - 5 C vs. G - - >1 (-) 37 (-) <0.05
rs1521 chr6:31350704 RNU6-283P [+12687bp] C - 12 T vs. C 0.283 (C) 0.108 (C) <1 (-) 24 (-) <0.05
rs13214113 chr6:31328400 HLA-B [+3435bp] C - 5 T vs. C 0.075 (T) 0.175 (T) >1 (-) 37 (-) <0.05
rs2844533 chr6:31350802 RNU6-283P [+12785bp] C - 12 A vs. G 0.275 (G) 0.108 (G) <1 (-) 24 (-) <0.05

Association studies for this region [+]