PDPN, chr1:13909960-13944452 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77767280 chr1:13890612 PDPN [-19348bp] C - 3 A vs. T - 0.125 (T) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1772635 chr1:13948225 RNA5SP41 [-1454bp] C - 13 A vs. C 0.267 (C) 0.267 (C) <1 (-) 9 (-) >0.05
rs61709679 chr1:13889947 PDPN [-20013bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12561812 chr1:13973250 RNA5SP41 [+23471bp] C - 7 T vs. G 0.033 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs599335 chr1:13874244 LRRC38 [+33701bp] C - 13 A vs. G 0.192 (G) 0.333 (A) <1 (-) 53 (-) >0.05
rs116130579 chr1:13973144 RNA5SP41 [+23365bp] C - 13 A vs. G 0.017 (A) - <1 (-) 8 (-) >0.05
rs655839 chr1:13900468 PDPN [-9492bp] C - 13 A vs. T 0.35 (T) 0.425 (A) <1 (-) 0 (-) >0.05
rs72866362 chr1:13863331 LRRC38 [+22788bp] C - 13 T vs. G 0.05 (T) 0.133 (T) <1 (-) 9 (-) >0.05
rs10927905 chr1:13916997 PDPN C - 13 T vs. C 0.067 (C) 0.4 (T) >1 (-) 0 (-) >0.05
rs137855358 chr1:13897512 PDPN [-12448bp] C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs12566330 chr1:13862268 LRRC38 [+21725bp] C - 13 T vs. C 0.05 (T) 0.133 (T) <1 (-) 10 (-) >0.05
rs78891161 chr1:13864408 LRRC38 [+23865bp] C - 13 A vs. T 0.042 (T) - >1 (-) 11 (-) >0.05
rs74707400 chr1:13863106 LRRC38 [+22563bp] C - 13 T vs. G 0.05 (G) 0.133 (G) >1 (-) 11 (-) >0.05
rs77673607 chr1:13863078 LRRC38 [+22535bp] C - 13 A vs. G 0.05 (G) 0.133 (G) >1 (-) 11 (-) >0.05
rs1767679 chr1:13874226 LRRC38 [+33683bp] C - 13 T vs. C 0.092 (C) 0.083 (C) <1 (-) 0 (-) >0.05
rs12031781 chr1:13910152 PDPN C - 13 T vs. C 0.142 (T) - >1 (-) 0 (-) >0.05
rs41269209 chr1:13936839 PDPN C - 11 A vs. G - - <1 (-) 17 (-) >0.05
rs115852950 chr1:13990713 PRDM2 [-35980bp] C - 13 A vs. G - - >1 (-) 1 (-) >0.05
rs114942088 chr1:13961437 RNA5SP41 [+11658bp] C - 10 A vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs75684979 chr1:13861654 LRRC38 [+21111bp] C - 13 T vs. G - 0.133 (G) >1 (-) 8 (-) >0.05
rs79932419 chr1:13861468 LRRC38 [+20925bp] C - 13 A vs. G 0.05 (G) 0.133 (G) >1 (-) 9 (-) >0.05
rs78877026 chr1:13860226 LRRC38 [+19683bp] C - 13 T vs. C - - <1 (-) 9 (-) >0.05
rs2940303 chr1:13901298 PDPN [-8662bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs56754754 chr1:13908554 PDPN [-1406bp] C - 13 A vs. T 0.15 (A) - >1 (-) 0 (-) >0.05
rs57902064 chr1:13901106 PDPN [-8854bp] C - 4 A vs. T - - <1 (-) 0 (-) >0.05
rs114079997 chr1:13936239 PDPN C - 11 A vs. G 0.017 (G) - >1 (-) 17 (-) >0.05
rs139625446 chr1:13935573 PDPN C - 11 T vs. C - - >1 (-) 17 (-) >0.05
rs75843550 chr1:13860586 LRRC38 [+20043bp] C - 13 A vs. T 0.05 (T) 0.133 (T) >1 (-) 8 (-) >0.05
rs76278708 chr1:13865064 LRRC38 [+24521bp] C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs142290545 chr1:13860233 LRRC38 [+19690bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs76668251 chr1:13939197 PDPN C - 11 A vs. C - 0.05 (A) <1 (-) 17 (-) >0.05
rs74056403 chr1:13950070 RNA5SP41 [+291bp] C - 10 A vs. G 0.025 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs16852432 chr1:13949831 RNA5SP41 [+52bp] C - 10 A vs. G 0.025 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs12739225 chr1:13859981 LRRC38 [+19438bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs58121320 chr1:13890776 PDPN [-19184bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2275384 chr1:13940560 PDPN C - 11 A vs. C 0.017 (C) 0.05 (C) >1 (-) 16 (-) >0.05
rs117634338 chr1:13943470 PDPN C - 11 A vs. G - 0.05 (A) <1 (-) 14 (-) >0.05
rs61778463 chr1:13862092 LRRC38 [+21549bp] C - 13 A vs. G 0.1 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs77244498 chr1:13941452 PDPN C - 11 T vs. C 0.017 (C) 0.05 (C) >1 (-) 16 (-) >0.05
rs61516987 chr1:13890765 PDPN [-19195bp] C - 13 T vs. C 0.217 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs12137857 chr1:13944326 PDPN C - 11 T vs. C - 0.05 (C) >1 (-) 19 (-) >0.05
rs10927825 chr1:13861526 LRRC38 [+20983bp] C - 13 T vs. G 0.1 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs4661673 chr1:13889395 PDPN [-20565bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs144595721 chr1:13879851 PDPN [-30109bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs12131411 chr1:13942902 PDPN C - 11 A vs. G 0.017 (A) 0.042 (A) <1 (-) 15 (-) >0.05
rs12136663 chr1:13942866 PDPN C - 11 A vs. T 0.008 (A) 0.05 (A) <1 (-) 15 (-) >0.05
rs75450360 chr1:13977088 RNA5SP41 [+27309bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs139056977 chr1:13954397 RNA5SP41 [+4618bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs74984039 chr1:13956634 RNA5SP41 [+6855bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs1148456 chr1:13927095 PDPN C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs12070737 chr1:13923464 PDPN C - 3 A vs. G - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.