PDPN, chr1:13909960-13944452 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77767280 chr1:13890612 PDPN [-19348bp] C - 3 A vs. T - 0.125 (T) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs75384968 chr1:13874564 LRRC38 [+34021bp] C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs115837798 chr1:13944973 PDPN [+521bp] C - 11 T vs. C 0.017 (T) 0.05 (T) <1 (-) 15 (-) >0.05
rs354580 chr1:13888790 PDPN [-21170bp] C - 13 T vs. C 0.25 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs77115659 chr1:13923470 PDPN C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs10927913 chr1:13956313 RNA5SP41 [+6534bp] C - 10 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs116408636 chr1:13953517 RNA5SP41 [+3738bp] C - 10 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs12564824 chr1:13914447 PDPN C - 13 T vs. C - 0.025 (C) <1 (-) 0 (-) >0.05
rs4661730 chr1:13913301 PDPN C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs678489 chr1:13872476 LRRC38 [+31933bp] C - 13 A vs. G 0.208 (G) 0.342 (A) <1 (-) 47 (-) >0.05
rs35474748 chr1:13867796 LRRC38 [+27253bp] C - 13 A vs. G 0.1 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs11805703 chr1:13861990 LRRC38 [+21447bp] C - 13 C vs. G 0.15 (C) 0.233 (C) <1 (-) 0 (-) >0.05
rs61057420 chr1:13893352 PDPN [-16608bp] C - 6 T vs. C - - >1 (-) 38 (-) >0.05
rs4661725 chr1:13910681 PDPN C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs12136848 chr1:13944175 PDPN C - 11 A vs. C - 0.05 (C) >1 (-) 13 (-) >0.05
rs12136321 chr1:13932180 PDPN C - 11 T vs. C - - >1 (-) 6 (-) >0.05
rs612824 chr1:13872442 LRRC38 [+31899bp] C - 13 A vs. G 0.183 (A) 0.333 (G) >1 (-) 49 (-) >0.05
rs79988741 chr1:13865015 LRRC38 [+24472bp] C - 13 T vs. C - - >1 (-) 11 (-) >0.05
rs12047030 chr1:13885753 PDPN [-24207bp] C - 8 A vs. T 0.058 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs10927827 chr1:13861572 LRRC38 [+21029bp] C - 13 A vs. G 0.1 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs678477 chr1:13872464 LRRC38 [+31921bp] C - 13 T vs. C 0.208 (T) 0.333 (C) >1 (-) 48 (-) >0.05
rs12034380 chr1:13866127 LRRC38 [+25584bp] C - 13 A vs. G 0.1 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs10927826 chr1:13861563 LRRC38 [+21020bp] C - 13 T vs. G 0.1 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs80122938 chr1:13957636 RNA5SP41 [+7857bp] C - 4 T vs. C - 0.042 (T) <1 (-) 24 (-) >0.05
rs612847 chr1:13872459 LRRC38 [+31916bp] C - 13 T vs. C 0.2 (T) 0.333 (C) >1 (-) 48 (-) >0.05
rs16851895 chr1:13909432 PDPN [-528bp] C - 13 T vs. C - 0.025 (C) <1 (-) 0 (-) >0.05
rs12036209 chr1:13865041 LRRC38 [+24498bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12126475 chr1:13932925 PDPN C - 11 C vs. G - 0.042 (C) >1 (-) 14 (-) >0.05
rs138792729 chr1:13925062 PDPN C - 9 T vs. C - - <1 (-) 14 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.