PDPN, chr1:13909960-13944452 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77767280 chr1:13890612 PDPN [-19348bp] C - 3 A vs. T - 0.125 (T) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs354568 chr1:13861660 LRRC38 [+21117bp] C - 5 T vs. C - 0.075 (C) >1 (-) 0 (-) >0.05
rs1767676 chr1:13946868 PDPN [+2416bp] C - 13 A vs. G 0.408 (A) 0.2 (A) >1 (-) 7 (-) >0.05
rs7530115 chr1:13887751 PDPN [-22209bp] C - 13 T vs. G - - >1 (-) 10 (-) >0.05
rs34866970 chr1:13888716 PDPN [-21244bp] C - 13 A vs. G 0.083 (G) 0.042 (G) <1 (-) 15 (-) >0.05
rs1148455 chr1:13914230 PDPN C - 13 T vs. C 0.275 (T) 0.375 (C) >1 (-) 0 (-) >0.05
rs61777777 chr1:13906611 PDPN [-3349bp] C - 7 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs13375580 chr1:13875896 PDPN [-34064bp] C - 13 C vs. G 0.475 (C) 0.317 (C) <1 (-) 0 (-) >0.05
rs1106669 chr1:13945379 PDPN [+927bp] C - 13 T vs. C 0.408 (T) 0.2 (T) >1 (-) 8 (-) >0.05
rs4489551 chr1:13969894 RNA5SP41 [+20115bp] C - 13 T vs. C 0.083 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs16851817 chr1:13903441 PDPN [-6519bp] C - 5 A vs. G - 0.033 (A) <1 (-) 0 (-) >0.05
rs146139856 chr1:13913540 PDPN C - 8 A vs. G - - >1 (-) 48 (-) >0.05
rs150743671 chr1:13873209 LRRC38 [+32666bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs74226256 chr1:13888798 PDPN [-21162bp] C - 13 T vs. C - 0.175 (C) >1 (-) 38 (-) >0.05
rs10927854 chr1:13872988 LRRC38 [+32445bp] C - 13 T vs. C 0.492 (T) 0.175 (T) <1 (-) 27 (-) >0.05
rs6429775 chr1:13869642 LRRC38 [+29099bp] C - 13 A vs. C - - <1 (-) 19 (-) >0.05
rs143344366 chr1:13970265 RNA5SP41 [+20486bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4328067 chr1:13970276 RNA5SP41 [+20497bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12130956 chr1:13992029 PRDM2 [-34664bp] C - 12 A vs. G 0.4 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs115599599 chr1:13970856 RNA5SP41 [+21077bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs35164922 chr1:13888311 PDPN [-21649bp] C - 13 T vs. G 0.092 (G) - <1 (-) 22 (-) >0.05
rs77407013 chr1:13914064 PDPN C - 3 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs12144423 chr1:13951715 RNA5SP41 [+1936bp] C - 13 A vs. G 0.458 (A) 0.275 (G) <1 (-) 0 (-) >0.05
rs4661347 chr1:13889781 PDPN [-20179bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs10927845 chr1:13867621 LRRC38 [+27078bp] C - 13 A vs. C 0.475 (A) 0.225 (A) <1 (-) 20 (-) >0.05
rs3856279 chr1:13886184 PDPN [-23776bp] C - 13 C vs. G 0.275 (C) 0.283 (C) >1 (-) 2 (-) >0.05
rs6429782 chr1:13875012 LRRC38 [+34469bp] C - 13 A vs. G 0.492 (A) 0.175 (A) <1 (-) 23 (-) >0.05
rs147256000 chr1:13970226 RNA5SP41 [+20447bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs141778869 chr1:13877777 PDPN [-32183bp] C - 9 T vs. C - - <1 (-) 43 (-) >0.05
rs115042787 chr1:13897281 PDPN [-12679bp] C - 13 T vs. C 0.042 (T) - <1 (-) 0 (-) >0.05
rs12754253 chr1:13888001 PDPN [-21959bp] C - 13 T vs. C - - >1 (-) 22 (-) >0.05
rs151133694 chr1:13887288 PDPN [-22672bp] C - 8 T vs. C - - <1 (-) 46 (-) >0.05
rs4661410 chr1:13956731 RNA5SP41 [+6952bp] C - 13 A vs. G 0.483 (G) 0.192 (G) <1 (-) 0 (-) >0.05
rs4661336 chr1:13872151 LRRC38 [+31608bp] C - 13 T vs. C - - <1 (-) 26 (-) >0.05
rs74226254 chr1:13887280 PDPN [-22680bp] C - 13 T vs. G - 0.15 (G) >1 (-) 38 (-) >0.05
rs355021 chr1:13907789 PDPN [-2171bp] C - 13 T vs. C 0.133 (T) 0.425 (C) <1 (-) 2 (-) >0.05
rs4342846 chr1:13970089 RNA5SP41 [+20310bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs72474548 chr1:13886539 PDPN [-23421bp] C - 13 A vs. T 0.017 (T) 0.15 (T) >1 (-) 38 (-) >0.05
rs9662167 chr1:13951736 RNA5SP41 [+1957bp] C - 13 T vs. C 0.458 (C) 0.283 (T) >1 (-) 0 (-) >0.05
rs7554437 chr1:13865933 LRRC38 [+25390bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs10927912 chr1:13954168 RNA5SP41 [+4389bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs112674557 chr1:13912425 PDPN C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs12065235 chr1:13974540 RNA5SP41 [+24761bp] C - 13 A vs. T 0.058 (T) - <1 (-) 0 (-) >0.05
rs7543396 chr1:13952677 RNA5SP41 [+2898bp] C - 13 A vs. G 0.458 (A) 0.3 (G) <1 (-) 0 (-) >0.05
rs7530137 chr1:13952750 RNA5SP41 [+2971bp] C - 13 A vs. G 0.458 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs10803421 chr1:13956484 RNA5SP41 [+6705bp] C - 12 T vs. C 0.483 (T) 0.25 (C) <1 (-) 0 (-) >0.05
rs75438233 chr1:13970532 RNA5SP41 [+20753bp] C - 13 A vs. T 0.083 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs112381395 chr1:13970508 RNA5SP41 [+20729bp] C - 13 T vs. G 0.083 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs112920272 chr1:13970470 RNA5SP41 [+20691bp] C - 13 A vs. T 0.083 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs111984853 chr1:13970516 RNA5SP41 [+20737bp] C - 13 T vs. C 0.083 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs71629835 chr1:13864963 LRRC38 [+24420bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.