PDPN, chr1:13909960-13944452 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77767280 chr1:13890612 PDPN [-19348bp] C - 3 A vs. T - 0.125 (T) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1412838 chr1:13938377 PDPN C - 13 A vs. C 0.317 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs141765609 chr1:13961139 RNA5SP41 [+11360bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2361029 chr1:13886396 PDPN [-23564bp] C - 13 T vs. G 0.45 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs1767675 chr1:13946479 PDPN [+2027bp] C - 13 T vs. C 0.225 (C) 0.225 (C) >1 (-) 13 (-) >0.05
rs12057925 chr1:13968534 RNA5SP41 [+18755bp] C - 13 A vs. G 0.083 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs10927922 chr1:13964620 RNA5SP41 [+14841bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs76792928 chr1:13968520 RNA5SP41 [+18741bp] C - 13 A vs. G 0.083 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs12065465 chr1:13968477 RNA5SP41 [+18698bp] C - 13 T vs. C 0.083 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs355027 chr1:13912977 PDPN C - 13 T vs. C 0.158 (C) 0.417 (T) >1 (-) 0 (-) >0.05
rs10927911 chr1:13953556 RNA5SP41 [+3777bp] C - 13 A vs. C 0.458 (A) 0.258 (C) <1 (-) 0 (-) >0.05
rs4661422 chr1:13964256 RNA5SP41 [+14477bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12042662 chr1:13885279 PDPN [-24681bp] C - 13 A vs. G 0.2 (G) 0.225 (G) <1 (-) 16 (-) >0.05
rs80171840 chr1:13963869 RNA5SP41 [+14090bp] C - 13 A vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs2604095 chr1:13932529 PDPN C - 13 C vs. G 0.192 (C) 0.083 (C) >1 (-) 39 (-) >0.05
rs1269181 chr1:13924593 PDPN C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2486188 chr1:13940864 PDPN C - 3 C vs. G 0.042 (C) - >1 (-) 0 (-) >0.05
rs61777776 chr1:13904815 PDPN [-5145bp] C - 12 A vs. G 0.033 (G) - <1 (-) 25 (-) >0.05
rs6655981 chr1:13967032 RNA5SP41 [+17253bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7518611 chr1:13939545 PDPN C - 13 A vs. G 0.317 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs4662000 chr1:13967944 RNA5SP41 [+18165bp] C - 13 A vs. G 0.083 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs354998 chr1:13885520 PDPN [-24440bp] C - 13 A vs. G 0.2 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs434651 chr1:13916809 PDPN C - 13 T vs. C 0.492 (C) 0.275 (T) <1 (-) 0 (-) >0.05
rs71510947 chr1:13921657 PDPN C - 13 A vs. G 0.158 (G) - <1 (-) 0 (-) >0.05
rs1261009 chr1:13925797 PDPN C - 13 A vs. G 0.233 (G) 0.242 (G) <1 (-) 0 (-) >0.05
rs28752054 chr1:13971500 RNA5SP41 [+21721bp] C - 13 T vs. G 0.075 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs2990672 chr1:13918629 PDPN C - 13 C vs. G 0.125 (G) 0.317 (G) >1 (-) 27 (-) >0.05
rs1262460 chr1:13924863 PDPN C - 13 A vs. G 0.233 (G) 0.333 (G) <1 (-) 0 (-) >0.05
rs142970422 chr1:13980905 RNA5SP41 [+31126bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs17391786 chr1:13874054 LRRC38 [+33511bp] C - 13 T vs. C 0.025 (C) 0.142 (C) >1 (-) 0 (-) >0.05
rs4284259 chr1:13960093 RNA5SP41 [+10314bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs12045628 chr1:13885660 PDPN [-24300bp] C - 13 T vs. C 0.208 (C) 0.225 (C) <1 (-) 17 (-) >0.05
rs12059831 chr1:13959207 RNA5SP41 [+9428bp] C - 13 T vs. C 0.1 (C) - <1 (-) 0 (-) >0.05
rs12408369 chr1:13954726 RNA5SP41 [+4947bp] C - 10 A vs. G 0.075 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs112114305 chr1:13948495 RNA5SP41 [-1184bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs355023 chr1:13909142 PDPN [-818bp] C - 13 A vs. C 0.5 (A) 0.308 (A) <1 (-) 0 (-) >0.05
rs12409667 chr1:13955152 RNA5SP41 [+5373bp] C - 10 A vs. C 0.075 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs355024 chr1:13909912 PDPN [-48bp] C - 13 A vs. C 0.5 (A) 0.308 (A) <1 (-) 0 (-) >0.05
rs12058616 chr1:13958771 RNA5SP41 [+8992bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs145179525 chr1:13959079 RNA5SP41 [+9300bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs111648857 chr1:13897362 PDPN [-12598bp] C - 13 T vs. C 0.125 (T) - >1 (-) 12 (-) >0.05
rs35240023 chr1:13879402 PDPN [-30558bp] C - 13 A vs. G - - <1 (-) 44 (-) >0.05
rs114445436 chr1:13902428 PDPN [-7532bp] C - 4 T vs. C - 0.033 (T) <1 (-) 0 (-) >0.05
rs173312 chr1:13919357 PDPN C - 13 C vs. G 0.225 (G) 0.067 (G) <1 (-) 17 (-) >0.05
rs116417369 chr1:13909120 PDPN [-840bp] C - 8 A vs. G 0.017 (A) - >1 (-) 8 (-) >0.05
rs10927920 chr1:13963412 RNA5SP41 [+13633bp] C - 13 A vs. G 0.1 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs1262461 chr1:13908105 PDPN [-1855bp] C - 13 A vs. G 0.492 (G) 0.308 (A) <1 (-) 0 (-) >0.05
rs72647917 chr1:13884456 PDPN [-25504bp] C - 13 T vs. C 0.467 (C) 0.133 (C) >1 (-) 5 (-) >0.05
rs115997636 chr1:13942273 PDPN C - 3 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs77859342 chr1:13903782 PDPN [-6178bp] C - 4 T vs. C - 0.025 (T) <1 (-) 0 (-) >0.05
rs4661415 chr1:13963834 RNA5SP41 [+14055bp] C - 13 A vs. G 0.1 (A) 0.058 (A) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.