PDPN, chr1:13909960-13944452 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77767280 chr1:13890612 PDPN [-19348bp] C - 3 A vs. T - 0.125 (T) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2495037 chr1:13992846 PRDM2 [-33847bp] C - 13 A vs. G 0.1 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs2990685 chr1:13872197 LRRC38 [+31654bp] C - 13 T vs. C - - <1 (-) 53 (-) >0.05
rs3845611 chr1:13906978 PDPN [-2982bp] C - 13 T vs. G 0.142 (G) - <1 (-) 10 (-) >0.05
rs372488 chr1:13873563 LRRC38 [+33020bp] C - 13 A vs. G 0.208 (A) 0.333 (G) >1 (-) 53 (-) >0.05
rs183052 chr1:13867459 LRRC38 [+26916bp] C - 13 A vs. G 0.05 (G) 0.125 (G) >1 (-) 10 (-) >0.05
rs6678308 chr1:13863608 LRRC38 [+23065bp] C - 11 A vs. G - 0.133 (A) >1 (-) 0 (-) >0.05
rs78419163 chr1:13862202 LRRC38 [+21659bp] C - 11 T vs. C 0.008 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs2885134 chr1:13921934 PDPN C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs354584 chr1:13895789 PDPN [-14171bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs3013060 chr1:13871924 LRRC38 [+31381bp] C - 13 T vs. G 0.208 (G) 0.333 (T) <1 (-) 53 (-) >0.05
rs3013061 chr1:13871942 LRRC38 [+31399bp] C - 13 T vs. C 0.208 (C) 0.333 (T) <1 (-) 53 (-) >0.05
rs7545825 chr1:13887988 PDPN [-21972bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs116989351 chr1:13864089 LRRC38 [+23546bp] C - 11 A vs. G - 0.033 (A) >1 (-) 0 (-) >0.05
rs391127 chr1:13872776 LRRC38 [+32233bp] C - 13 A vs. G 0.208 (A) 0.333 (G) >1 (-) 53 (-) >0.05
rs143154928 chr1:13921447 PDPN C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs143651982 chr1:13871501 LRRC38 [+30958bp] C - 12 T vs. C - - <1 (-) 45 (-) >0.05
rs367102 chr1:13873608 LRRC38 [+33065bp] C - 13 A vs. G 0.208 (G) 0.333 (A) <1 (-) 53 (-) >0.05
rs444516 chr1:13870966 LRRC38 [+30423bp] C - 13 T vs. C 0.208 (T) 0.342 (C) >1 (-) 54 (-) >0.05
rs355020 chr1:13907484 PDPN [-2476bp] C - 13 A vs. G 0.083 (A) 0.492 (G) <1 (-) 0 (-) >0.05
rs12409563 chr1:13948263 RNA5SP41 [-1416bp] C - 7 A vs. G 0.142 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs1454862 chr1:13873444 LRRC38 [+32901bp] C - 13 T vs. C 0.208 (C) 0.333 (T) <1 (-) 53 (-) >0.05
rs404265 chr1:13870796 LRRC38 [+30253bp] C - 13 C vs. G 0.208 (C) 0.342 (G) >1 (-) 54 (-) >0.05
rs12138888 chr1:13945949 PDPN [+1497bp] C - 11 A vs. G - 0.05 (G) >1 (-) 17 (-) >0.05
rs1148454 chr1:13911393 PDPN C - 13 T vs. C 0.083 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs115467504 chr1:13993918 PRDM2 [-32775bp] C - 13 A vs. G 0.008 (G) - >1 (-) 9 (-) >0.05
rs10927910 chr1:13948765 RNA5SP41 [-914bp] C - 3 A vs. G 0.025 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs115768035 chr1:13950866 RNA5SP41 [+1087bp] C - 10 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs355017 chr1:13904887 PDPN [-5073bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs118016347 chr1:13992739 PRDM2 [-33954bp] C - 13 A vs. G - 0.017 (A) <1 (-) 9 (-) >0.05
rs12076662 chr1:13994228 PRDM2 [-32465bp] C - 13 T vs. C - 0.017 (T) <1 (-) 10 (-) >0.05
rs115217892 chr1:13993307 PRDM2 [-33386bp] C - 13 A vs. G 0.008 (A) - <1 (-) 9 (-) >0.05
rs1412839 chr1:13938511 PDPN C - 13 A vs. C 0.275 (A) 0.408 (A) <1 (-) 0 (-) >0.05
rs1610562 chr1:13874853 LRRC38 [+34310bp] C - 13 T vs. C 0.208 (C) 0.333 (T) <1 (-) 52 (-) >0.05
rs695098 chr1:13899004 PDPN [-10956bp] C - 13 T vs. G 0.35 (G) 0.425 (T) <1 (-) 0 (-) >0.05
rs2999868 chr1:13891443 PDPN [-18517bp] C - 13 C vs. G - - >1 (-) 19 (-) >0.05
rs116897306 chr1:13943478 PDPN C - 10 A vs. T - 0.017 (T) >1 (-) 18 (-) >0.05
rs1261026 chr1:13920807 PDPN C - 13 T vs. G 0.308 (T) 0.317 (G) >1 (-) 0 (-) >0.05
rs61776641 chr1:13889147 PDPN [-20813bp] C - 4 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs142483859 chr1:13979127 RNA5SP41 [+29348bp] C - 13 T vs. C - - <1 (-) 8 (-) >0.05
rs149672241 chr1:13979342 RNA5SP41 [+29563bp] C - 13 T vs. C - - <1 (-) 8 (-) >0.05
rs76027049 chr1:13868619 LRRC38 [+28076bp] C - 13 T vs. C 0.05 (C) 0.125 (C) >1 (-) 11 (-) >0.05
rs80095989 chr1:13868842 LRRC38 [+28299bp] C - 13 A vs. T 0.05 (T) 0.142 (T) >1 (-) 12 (-) >0.05
rs355029 chr1:13913439 PDPN C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs79290973 chr1:13968020 RNA5SP41 [+18241bp] C - 7 A vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs355031 chr1:13914622 PDPN C - 10 C vs. G - 0.017 (G) >1 (-) 0 (-) >0.05
rs116944585 chr1:13869073 LRRC38 [+28530bp] C - 13 A vs. G - 0.142 (G) >1 (-) 11 (-) >0.05
rs1261024 chr1:13919337 PDPN C - 13 A vs. G 0.058 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs11804743 chr1:13917411 PDPN C - 13 T vs. C 0.1 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs2492764 chr1:13872274 LRRC38 [+31731bp] C - 13 A vs. G - - >1 (-) 52 (-) >0.05
rs34897160 chr1:13884745 PDPN [-25215bp] C - 13 T vs. C - - >1 (-) 29 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.