PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4646343 chr17:17492077 PEMT C - 13 T vs. G 0.483 (G) 0.067 (T) >1 (-) 0 (-) >0.05
rs12452584 chr17:17502222 PEMT [+7200bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs112156600 chr17:17400810 RASD1 [+1101bp] C - 13 A vs. G 0.067 (A) - <1 (-) 51 (-) >0.05
rs4924999 chr17:17492002 PEMT C - 13 A vs. G 0.483 (A) 0.05 (G) <1 (-) 0 (-) >0.05
rs145926435 chr17:17379649 MED9 [-651bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs4646344 chr17:17492060 PEMT C - 12 A vs. G 0.483 (A) 0.067 (G) <1 (-) 0 (-) >0.05
rs73292347 chr17:17384207 MED9 C - 13 T vs. C 0.067 (T) - <1 (-) 56 (-) >0.05
rs16961834 chr17:17413965 PEMT C - 5 T vs. C 0.008 (C) - >1 (-) 41 (-) >0.05
rs77287723 chr17:17508656 PEMT [+13634bp] C - 13 C vs. G 0.042 (C) - <1 (-) 0 (-) >0.05
rs11078393 chr17:17543114 RAI1 [-41673bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs3744118 chr17:17448589 PEMT C - 13 T vs. C 0.025 (T) 0.042 (T) >1 (-) 9 (-) >0.05
rs3744117 chr17:17448594 PEMT C - 13 T vs. C 0.025 (T) 0.075 (T) >1 (-) 10 (-) >0.05
rs146230188 chr17:17509807 PEMT [+14785bp] C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs73981006 chr17:17525346 PEMT [+30324bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs2350631 chr17:17503544 PEMT [+8522bp] C - 13 T vs. C 0.458 (T) 0.392 (C) <1 (-) 0 (-) >0.05
rs12450508 chr17:17506097 PEMT [+11075bp] C - 13 T vs. C 0.042 (C) - >1 (-) 0 (-) >0.05
rs58251514 chr17:17543100 RAI1 [-41687bp] C - 13 T vs. C - - >1 (-) 41 (-) >0.05
rs79187121 chr17:17506790 PEMT [+11768bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs73981004 chr17:17525212 PEMT [+30190bp] C - 7 C vs. G - - <1 (-) 0 (-) >0.05
rs8066531 chr17:17514906 PEMT [+19884bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs139638159 chr17:17505537 PEMT [+10515bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2232841 chr17:17398363 RASD1 C - 13 T vs. C - - >1 (-) 52 (-) >0.05
rs78075290 chr17:17523107 PEMT [+28085bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs79182509 chr17:17501753 PEMT [+6731bp] C - 13 C vs. G 0.042 (C) - <1 (-) 0 (-) >0.05
rs114892192 chr17:17498492 PEMT [+3470bp] C - 13 T vs. C 0.042 (T) - <1 (-) 0 (-) >0.05
rs9897020 chr17:17514332 PEMT [+19310bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs56352670 chr17:17375773 MED9 [-4527bp] C - 13 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs61692723 chr17:17421451 PEMT C - 3 A vs. G - - >1 (-) 8 (-) >0.05
rs77943019 chr17:17463784 PEMT C - 11 A vs. G - - >1 (-) 11 (-) >0.05
rs76749797 chr17:17375443 MED9 [-4857bp] C - 13 T vs. G 0.05 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs11078390 chr17:17509687 PEMT [+14665bp] C - 13 T vs. C 0.417 (T) 0.408 (C) >1 (-) 0 (-) >0.05
rs1809206 chr17:17511387 PEMT [+16365bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1242507 chr17:17365399 MED9 [-14901bp] C - 13 A vs. G 0.392 (G) 0.233 (A) <1 (-) 0 (-) >0.05
rs2232830 chr17:17400111 RASD1 [+402bp] C - 13 T vs. C 0.067 (T) - <1 (-) 52 (-) >0.05
rs3760183 chr17:17400972 RASD1 [+1263bp] C - 12 T vs. G 0.083 (T) 0.342 (T) <1 (-) 0 (-) >0.05
rs111300422 chr17:17398249 RASD1 C - 13 C vs. G 0.067 (G) - >1 (-) 52 (-) >0.05
rs1242390 chr17:17414594 PEMT C - 7 T vs. C 0.008 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs12451393 chr17:17534339 PEMT [+39317bp] C - 13 A vs. G 0.042 (G) - >1 (-) 0 (-) >0.05
rs73288103 chr17:17511829 PEMT [+16807bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs70965410 chr17:17413080 PEMT C - 12 T vs. C 0.067 (T) - >1 (-) 43 (-) >0.05
rs70963019 chr17:17422497 PEMT C - 10 A vs. C 0.025 (A) - <1 (-) 0 (-) >0.05
rs4646342 chr17:17493272 PEMT C - 13 A vs. G 0.5 (A) 0.325 (A) >1 (-) 4 (-) >0.05
rs12150263 chr17:17516023 PEMT [+21001bp] C - 8 A vs. G 0.083 (A) - >1 (-) 40 (-) >0.05
rs141351490 chr17:17373060 MED9 [-7240bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs62066210 chr17:17520978 PEMT [+25956bp] C - 13 T vs. C 0.467 (T) 0.05 (T) >1 (-) 37 (-) >0.05
rs12452762 chr17:17529028 PEMT [+34006bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7207127 chr17:17370157 MED9 [-10143bp] C - 13 A vs. G 0.05 (A) 0.067 (A) >1 (-) 0 (-) >0.05
rs2232833 chr17:17399964 RASD1 [+255bp] C - 13 A vs. C 0.067 (A) - <1 (-) 52 (-) >0.05
rs146617501 chr17:17417226 PEMT C - 4 A vs. C - - <1 (-) 0 (-) >0.05
rs28375824 chr17:17361336 MED9 [-18964bp] C - 13 A vs. G 0.042 (G) 0.075 (G) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.