PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35372447 chr17:17520672 PEMT [+25650bp] C - 13 C vs. G - - >1 (-) 35 (-) >0.05
rs12165061 chr17:17530332 PEMT [+35310bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs79966498 chr17:17363186 MED9 [-17114bp] C - 13 A vs. G 0.042 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs12947517 chr17:17539278 PEMT [+44256bp] C - 13 T vs. C 0.458 (T) 0.075 (T) >1 (-) 36 (-) >0.05
rs2124344 chr17:17480195 PEMT C - 13 A vs. G 0.408 (A) 0.4 (G) >1 (-) 0 (-) >0.05
rs7215833 chr17:17507308 PEMT [+12286bp] C - 13 T vs. C 0.417 (T) 0.408 (C) >1 (-) 0 (-) >0.05
rs7213891 chr17:17364623 MED9 [-15677bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1531098 chr17:17465280 PEMT C - 13 T vs. C 0.3 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs12951347 chr17:17534513 PEMT [+39491bp] C - 13 C vs. G 0.475 (G) 0.067 (G) <1 (-) 35 (-) >0.05
rs77715683 chr17:17533363 PEMT [+38341bp] C - 13 T vs. C 0.042 (C) 0.025 (C) >1 (-) 0 (-) >0.05
rs75208159 chr17:17517915 PEMT [+22893bp] C - 13 A vs. T - 0.058 (T) >1 (-) 0 (-) >0.05
rs2232839 chr17:17399635 RASD1 C - 13 T vs. C 0.242 (T) - <1 (-) 0 (-) >0.05
rs4646372 chr17:17460180 PEMT C - 13 T vs. C 0.392 (T) 0.417 (C) >1 (-) 0 (-) >0.05
rs139292618 chr17:17530330 PEMT [+35308bp] C - 10 A vs. G - - <1 (-) 4 (-) >0.05
rs6502609 chr17:17506313 PEMT [+11291bp] C - 13 A vs. G 0.433 (A) 0.408 (G) >1 (-) 0 (-) >0.05
rs141685863 chr17:17544077 RAI1 [-40710bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs150255284 chr17:17402126 RASD1 [+2417bp] C - 4 A vs. C - - >1 (-) 33 (-) >0.05
rs57826838 chr17:17364357 MED9 [-15943bp] C - 13 T vs. C 0.042 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs897458 chr17:17511601 PEMT [+16579bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7221487 chr17:17459654 PEMT C - 13 A vs. G 0.392 (G) 0.4 (A) <1 (-) 0 (-) >0.05
rs11078389 chr17:17478352 PEMT C - 13 T vs. C 0.4 (T) 0.267 (C) >1 (-) 0 (-) >0.05
rs11867208 chr17:17504609 PEMT [+9587bp] C - 13 T vs. C 0.417 (T) 0.408 (C) >1 (-) 0 (-) >0.05
rs12945496 chr17:17537197 PEMT [+42175bp] C - 13 C vs. G 0.467 (C) 0.067 (C) >1 (-) 34 (-) >0.05
rs3760185 chr17:17401736 RASD1 [+2027bp] C - 13 T vs. C 0.242 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs8082417 chr17:17463799 PEMT C - 13 C vs. G 0.392 (C) 0.417 (G) >1 (-) 0 (-) >0.05
rs4646369 chr17:17463335 PEMT C - 13 A vs. G 0.4 (A) 0.275 (G) >1 (-) 0 (-) >0.05
rs80137695 chr17:17535437 PEMT [+40415bp] C - 13 C vs. G 0.042 (C) - <1 (-) 0 (-) >0.05
rs11651004 chr17:17366382 MED9 [-13918bp] C - 8 T vs. C - - >1 (-) 37 (-) >0.05
rs12936587 chr17:17543722 RAI1 [-41065bp] C - 13 A vs. G 0.5 (A) 0.1 (A) >1 (-) 40 (-) >0.05
rs78302866 chr17:17365536 MED9 [-14764bp] C - 13 A vs. G 0.05 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs12942708 chr17:17528011 PEMT [+32989bp] C - 13 T vs. C 0.475 (T) 0.042 (T) >1 (-) 40 (-) >0.05
rs73978989 chr17:17498220 PEMT [+3198bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs4646346 chr17:17478917 PEMT C - 13 T vs. C 0.4 (C) 0.275 (T) <1 (-) 0 (-) >0.05
rs139747163 chr17:17501949 PEMT [+6927bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs4244596 chr17:17459035 PEMT C - 13 C vs. G 0.392 (C) 0.417 (G) <1 (-) 0 (-) >0.05
rs12943416 chr17:17535535 PEMT [+40513bp] C - 13 A vs. C 0.45 (C) 0.05 (C) <1 (-) 35 (-) >0.05
rs77799382 chr17:17530681 PEMT [+35659bp] C - 12 C vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs12939297 chr17:17524247 PEMT [+29225bp] C - 13 A vs. G 0.467 (A) 0.058 (A) >1 (-) 38 (-) >0.05
rs70963037 chr17:17417594 PEMT C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs73981015 chr17:17543455 RAI1 [-41332bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs2660831 chr17:17360046 MED9 [-20254bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs729974 chr17:17475567 PEMT C - 13 T vs. C 0.4 (T) 0.408 (C) >1 (-) 0 (-) >0.05
rs4646341 chr17:17493810 PEMT C - 13 A vs. G 0.408 (A) 0.417 (G) <1 (-) 0 (-) >0.05
rs12948060 chr17:17477384 PEMT C - 13 T vs. C 0.392 (T) 0.417 (C) >1 (-) 0 (-) >0.05
rs11654842 chr17:17462620 PEMT C - 13 A vs. G 0.4 (G) 0.417 (A) <1 (-) 0 (-) >0.05
rs729975 chr17:17475468 PEMT C - 13 A vs. G 0.4 (A) 0.275 (G) >1 (-) 0 (-) >0.05
rs4646370 chr17:17460792 PEMT C - 13 T vs. C 0.4 (C) 0.408 (T) <1 (-) 0 (-) >0.05
rs11871738 chr17:17525243 PEMT [+30221bp] C - 13 A vs. G 0.467 (G) 0.058 (G) <1 (-) 39 (-) >0.05
rs9895955 chr17:17505452 PEMT [+10430bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7209113 chr17:17476021 PEMT C - 13 A vs. G 0.4 (G) 0.417 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.