PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs150028451 chr17:17540348 RAI1 [-44439bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs70963034 chr17:17418501 PEMT C - 13 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs60831194 chr17:17466052 PEMT C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7215055 chr17:17458353 PEMT C - 13 A vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs11651280 chr17:17449917 PEMT C - 13 T vs. G 0.05 (T) - <1 (-) 0 (-) >0.05
rs28652618 chr17:17482766 PEMT C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs117974034 chr17:17512798 PEMT [+17776bp] C - 5 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs117532651 chr17:17513001 PEMT [+17979bp] C - 5 A vs. C 0.008 (A) - <1 (-) 0 (-) >0.05
rs35838363 chr17:17466572 PEMT C - 13 A vs. C 0.05 (A) - <1 (-) 0 (-) >0.05
rs12941371 chr17:17438318 PEMT C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4646392 chr17:17441359 PEMT C - 13 A vs. C 0.442 (C) 0.408 (A) >1 (-) 0 (-) >0.05
rs4646391 chr17:17441369 PEMT C - 13 C vs. G 0.442 (C) 0.4 (G) <1 (-) 0 (-) >0.05
rs7222358 chr17:17459620 PEMT C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1109859 chr17:17424333 PEMT C - 13 A vs. G 0.15 (G) 0.483 (A) >1 (-) 0 (-) >0.05
rs11658311 chr17:17470526 PEMT C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs142831150 chr17:17515731 PEMT [+20709bp] C - 8 A vs. G - - >1 (-) 9 (-) >0.05
rs12945144 chr17:17433777 PEMT C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs9905191 chr17:17469918 PEMT C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs11657678 chr17:17424303 PEMT C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs11658944 chr17:17425279 PEMT C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs8071007 chr17:17506892 PEMT [+11870bp] C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs16961845 chr17:17432456 PEMT C - 13 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs8070432 chr17:17480474 PEMT C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs11658872 chr17:17425069 PEMT C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11651620 chr17:17444874 PEMT C - 13 A vs. G 0.433 (G) 0.4 (A) >1 (-) 0 (-) >0.05
rs55964214 chr17:17428851 PEMT C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs4646387 chr17:17444584 PEMT C - 13 T vs. G 0.433 (G) 0.408 (T) >1 (-) 0 (-) >0.05
rs60441671 chr17:17534067 PEMT [+39045bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs9904004 chr17:17476791 PEMT C - 13 A vs. G 0.05 (G) - >1 (-) 1 (-) >0.05
rs59387776 chr17:17430085 PEMT C - 13 A vs. T 0.025 (A) - <1 (-) 0 (-) >0.05
rs4646389 chr17:17444349 PEMT C - 13 A vs. C 0.433 (C) 0.392 (A) >1 (-) 0 (-) >0.05
rs897456 chr17:17422608 PEMT C - 13 A vs. G 0.05 (G) 0.208 (G) >1 (-) 0 (-) >0.05
rs80097961 chr17:17430373 PEMT C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs116876078 chr17:17440915 PEMT C - 6 T vs. G 0.008 (T) - >1 (-) 0 (-) >0.05
rs4646388 chr17:17444369 PEMT C - 13 A vs. G 0.433 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs28583584 chr17:17483297 PEMT C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs74609824 chr17:17481353 PEMT C - 13 T vs. G 0.05 (T) - <1 (-) 0 (-) >0.05
rs7224725 chr17:17484654 PEMT C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs56030759 chr17:17482025 PEMT C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs138302968 chr17:17442483 PEMT C - 4 T vs. C - - >1 (-) 50 (-) >0.05
rs70963009 chr17:17424047 PEMT C - 10 T vs. C 0.033 (T) - >1 (-) 21 (-) >0.05
rs6502603 chr17:17445680 PEMT C - 13 T vs. G 0.433 (G) 0.408 (T) >1 (-) 0 (-) >0.05
rs10401038 chr17:17433591 PEMT C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs9903468 chr17:17432919 PEMT C - 13 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs73978990 chr17:17504559 PEMT [+9537bp] C - 13 T vs. G 0.05 (T) - <1 (-) 0 (-) >0.05
rs4646396 chr17:17432744 PEMT C - 13 A vs. G 0.45 (G) 0.267 (A) >1 (-) 0 (-) >0.05
rs4646404 chr17:17420199 PEMT C - 13 A vs. G 0.383 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs4646394 chr17:17440595 PEMT C - 13 A vs. C 0.433 (A) 0.408 (C) <1 (-) 0 (-) >0.05
rs9889584 chr17:17434141 PEMT C - 13 A vs. G 0.067 (A) - <1 (-) 0 (-) >0.05
rs78302208 chr17:17544835 RAI1 [-39952bp] C - 13 T vs. C 0.075 (C) 0.242 (C) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.