PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242491 chr17:17374218 MED9 [-6082bp] C - 13 T vs. C 0.183 (T) 0.333 (C) <1 (-) 5 (-) >0.05
rs73978969 chr17:17444790 PEMT C - 13 T vs. G 0.058 (T) - <1 (-) 0 (-) >0.05
rs11650942 chr17:17447378 PEMT C - 12 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs8081961 chr17:17444366 PEMT C - 13 A vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs8064558 chr17:17444277 PEMT C - 13 T vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs7217764 chr17:17495766 PEMT [+744bp] C - 13 T vs. G 0.05 (T) - <1 (-) 0 (-) >0.05
rs7214988 chr17:17491836 PEMT C - 13 C vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs9889795 chr17:17434214 PEMT C - 13 T vs. G 0.075 (T) - <1 (-) 0 (-) >0.05
rs112244104 chr17:17438118 PEMT C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs138241320 chr17:17403132 RASD1 [+3423bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs8081152 chr17:17435179 PEMT C - 13 C vs. G 0.075 (C) - <1 (-) 0 (-) >0.05
rs57277948 chr17:17481317 PEMT C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7214152 chr17:17440823 PEMT C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs9910747 chr17:17433959 PEMT C - 13 A vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs4646402 chr17:17421187 PEMT C - 13 C vs. G 0.375 (G) 0.258 (C) >1 (-) 0 (-) >0.05
rs149292151 chr17:17481683 PEMT C - 3 T vs. G - - <1 (-) 16 (-) >0.05
rs11654777 chr17:17462630 PEMT C - 13 C vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs111935621 chr17:17428226 PEMT C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs750546 chr17:17439458 PEMT C - 13 T vs. C 0.45 (C) 0.417 (T) >1 (-) 0 (-) >0.05
rs11656215 chr17:17453067 PEMT C - 13 T vs. C 0.467 (C) 0.267 (T) >1 (-) 0 (-) >0.05
rs4646399 chr17:17431527 PEMT C - 10 T vs. C - 0.108 (T) >1 (-) 0 (-) >0.05
rs4244593 chr17:17420218 PEMT C - 13 T vs. G 0.367 (T) 0.5 (T) <1 (-) 2 (-) >0.05
rs1242510 chr17:17371405 MED9 [-8895bp] C - 13 T vs. C 0.142 (C) 0.333 (T) >1 (-) 2 (-) >0.05
rs2168345 chr17:17419338 PEMT C - 13 C vs. G 0.367 (G) 0.483 (G) >1 (-) 3 (-) >0.05
rs9908984 chr17:17424499 PEMT C - 13 C vs. G 0.483 (C) - >1 (-) 14 (-) >0.05
rs1242515 chr17:17385990 MED9 C - 13 A vs. C 0.267 (C) 0.242 (A) >1 (-) 0 (-) >0.05
rs1242518 chr17:17387899 MED9 C - 13 T vs. C 0.275 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs58729290 chr17:17446940 PEMT C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs1242505 chr17:17366977 MED9 [-13323bp] C - 13 A vs. G 0.192 (G) 0.25 (A) >1 (-) 0 (-) >0.05
rs897453 chr17:17425631 PEMT C - 13 T vs. C 0.492 (T) 0.117 (T) >1 (-) 15 (-) >0.05
rs11078388 chr17:17435071 PEMT C - 13 T vs. C 0.5 (C) 0.208 (T) >1 (-) 0 (-) >0.05
rs1242517 chr17:17387841 MED9 C - 13 T vs. C 0.258 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs9890062 chr17:17434352 PEMT C - 13 A vs. G - - <1 (-) 7 (-) >0.05
rs9893179 chr17:17452512 PEMT C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1242511 chr17:17369970 MED9 [-10330bp] C - 13 C vs. G 0.192 (G) 0.25 (C) >1 (-) 0 (-) >0.05
rs3744120 chr17:17425517 PEMT C - 3 A vs. G - 0.192 (G) >1 (-) 0 (-) >0.05
rs4924755 chr17:17397131 MED9 [+591bp] C - 13 C vs. G 0.258 (G) 0.225 (C) >1 (-) 0 (-) >0.05
rs35656361 chr17:17434218 PEMT C - 13 A vs. G 0.5 (A) 0.217 (A) >1 (-) 0 (-) >0.05
rs2694920 chr17:17390589 MED9 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4646409 chr17:17410053 PEMT C - 13 A vs. G 0.108 (A) 0.5 (A) <1 (-) 0 (-) >0.05
rs8068641 chr17:17480187 PEMT C - 13 A vs. G 0.058 (G) 0.108 (G) >1 (-) 0 (-) >0.05
rs111930688 chr17:17363132 MED9 [-17168bp] C - 10 A vs. G - - <1 (-) 22 (-) >0.05
rs1242499 chr17:17379267 MED9 [-1033bp] C - 12 A vs. C 0.192 (A) 0.242 (C) <1 (-) 0 (-) >0.05
rs149256055 chr17:17519689 PEMT [+24667bp] C - 7 A vs. T - - >1 (-) 0 (-) >0.05
rs4925051 chr17:17535581 PEMT [+40559bp] C - 13 T vs. C 0.075 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs1242503 chr17:17368149 MED9 [-12151bp] C - 13 A vs. C 0.192 (C) 0.25 (A) >1 (-) 0 (-) >0.05
rs12601185 chr17:17541559 RAI1 [-43228bp] C - 13 T vs. G 0.025 (G) 0.267 (G) <1 (-) 0 (-) >0.05
rs4925049 chr17:17533991 PEMT [+38969bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7210978 chr17:17436451 PEMT C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs70965415 chr17:17411978 PEMT C - 10 T vs. C 0.017 (C) - >1 (-) 16 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.