PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9890324 chr17:17538142 PEMT [+43120bp] C - 13 C vs. G 0.075 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs73978972 chr17:17449134 PEMT C - 6 T vs. G 0.008 (G) 0.142 (G) <1 (-) 29 (-) >0.05
rs11652200 chr17:17402959 RASD1 [+3250bp] C - 13 C vs. G 0.192 (G) 0.233 (C) >1 (-) 0 (-) >0.05
rs146769710 chr17:17499965 PEMT [+4943bp] C - 12 T vs. C - - <1 (-) 13 (-) >0.05
rs4924922 chr17:17430649 PEMT C - 13 T vs. C 0.358 (T) 0.375 (T) <1 (-) 0 (-) >0.05
rs147808844 chr17:17536117 PEMT [+41095bp] C - 11 T vs. C - - >1 (-) 48 (-) >0.05
rs1242501 chr17:17379517 MED9 [-783bp] C - 13 A vs. T 0.192 (T) 0.242 (A) >1 (-) 0 (-) >0.05
rs1242500 chr17:17379382 MED9 [-918bp] C - 13 T vs. C 0.192 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs149592695 chr17:17442496 PEMT C - 4 T vs. C - - >1 (-) 26 (-) >0.05
rs73296555 chr17:17442120 PEMT C - 4 C vs. G - - >1 (-) 26 (-) >0.05
rs4646397 chr17:17432098 PEMT C - 13 T vs. C 0.383 (T) 0.425 (C) <1 (-) 0 (-) >0.05
rs746899 chr17:17426009 PEMT C - 13 T vs. C 0.367 (T) 0.442 (C) <1 (-) 0 (-) >0.05
rs1242502 chr17:17381764 MED9 C - 13 T vs. C 0.192 (T) 0.242 (C) <1 (-) 0 (-) >0.05
rs111766238 chr17:17430614 PEMT C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs1263509 chr17:17382245 MED9 C - 13 T vs. C 0.192 (T) 0.242 (C) <1 (-) 0 (-) >0.05
rs8074191 chr17:17407191 PEMT [-1686bp] C - 13 T vs. C 0.25 (T) 0.242 (C) <1 (-) 0 (-) >0.05
rs58930818 chr17:17430767 PEMT C - 13 A vs. G 0.05 (A) 0.083 (A) >1 (-) 0 (-) >0.05
rs75529714 chr17:17427492 PEMT C - 13 A vs. G 0.058 (A) 0.15 (A) >1 (-) 0 (-) >0.05
rs8074074 chr17:17407816 PEMT [-1061bp] C - 13 T vs. C 0.275 (C) 0.242 (T) >1 (-) 0 (-) >0.05
rs2660836 chr17:17389787 MED9 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs113849478 chr17:17428208 PEMT C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs4924877 chr17:17402049 RASD1 [+2340bp] C - 13 T vs. C 0.217 (C) 0.192 (T) >1 (-) 0 (-) >0.05
rs4244594 chr17:17429927 PEMT C - 13 A vs. G 0.358 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs72828501 chr17:17491184 PEMT C - 7 T vs. C 0.067 (T) - >1 (-) 33 (-) >0.05
rs2694927 chr17:17378504 MED9 [-1796bp] C - 13 T vs. C 0.192 (C) 0.225 (T) >1 (-) 0 (-) >0.05
rs70963029 chr17:17419466 PEMT C - 9 A vs. G - - <1 (-) 15 (-) >0.05
rs117177651 chr17:17373307 MED9 [-6993bp] C - 4 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs9891340 chr17:17543846 RAI1 [-40941bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs80338266 chr17:17367103 MED9 [-13197bp] C - 13 A vs. G 0.058 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs57608533 chr17:17530781 PEMT [+35759bp] C - 13 A vs. T 0.017 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs72836867 chr17:17519923 PEMT [+24901bp] C - 12 C vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs139369679 chr17:17427926 PEMT C - 5 A vs. T - - <1 (-) 43 (-) >0.05
rs1242498 chr17:17378887 MED9 [-1413bp] C - 13 T vs. G 0.192 (G) 0.217 (T) >1 (-) 0 (-) >0.05
rs711352 chr17:17397818 RASD1 C - 13 C vs. G 0.192 (G) 0.233 (C) >1 (-) 1 (-) >0.05
rs140656550 chr17:17443600 PEMT C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs12373156 chr17:17417606 PEMT C - 10 A vs. G 0.033 (A) - <1 (-) 24 (-) >0.05
rs139708426 chr17:17452812 PEMT C - 4 A vs. G - - <1 (-) 30 (-) >0.05
rs2660834 chr17:17375254 MED9 [-5046bp] C - 13 T vs. C - - >1 (-) 1 (-) >0.05
rs6502611 chr17:17536348 PEMT [+41326bp] C - 13 T vs. C 0.075 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs148456980 chr17:17442815 PEMT C - 7 T vs. G - - <1 (-) 27 (-) >0.05
rs8078513 chr17:17431208 PEMT C - 13 A vs. C 0.058 (A) - <1 (-) 0 (-) >0.05
rs70963102 chr17:17414196 PEMT C - 7 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs2694926 chr17:17376389 MED9 [-3911bp] C - 13 A vs. G 0.192 (A) 0.258 (G) <1 (-) 0 (-) >0.05
rs1242506 chr17:17366377 MED9 [-13923bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs78242154 chr17:17535596 PEMT [+40574bp] C - 11 T vs. G 0.017 (G) - <1 (-) 34 (-) >0.05
rs73300565 chr17:17482434 PEMT C - 10 T vs. G - 0.133 (T) >1 (-) 0 (-) >0.05
rs113801858 chr17:17489151 PEMT C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs4646400 chr17:17425858 PEMT C - 13 T vs. C 0.058 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs9892560 chr17:17438031 PEMT C - 13 T vs. C 0.383 (C) 0.358 (T) >1 (-) 0 (-) >0.05
rs58874056 chr17:17484719 PEMT C - 10 A vs. G - 0.1 (A) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.