PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs8074794 chr17:17534729 PEMT [+39707bp] C - 13 A vs. C 0.408 (A) 0.392 (C) >1 (-) 0 (-) >0.05
rs4646368 chr17:17465458 PEMT C - 13 A vs. G 0.45 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs142467795 chr17:17456655 PEMT C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs140180958 chr17:17371896 MED9 [-8404bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs140068830 chr17:17433938 PEMT C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs56081808 chr17:17374785 MED9 [-5515bp] C - 13 T vs. C - - <1 (-) 15 (-) >0.05
rs4646403 chr17:17420793 PEMT C - 13 T vs. C 0.475 (C) 0.125 (T) >1 (-) 0 (-) >0.05
rs141294595 chr17:17535656 PEMT [+40634bp] C - 3 T vs. C - - >1 (-) 4 (-) >0.05
rs9894588 chr17:17447138 PEMT C - 13 A vs. G - 0.117 (A) >1 (-) 0 (-) >0.05
rs3816511 chr17:17409401 PEMT C - 13 A vs. G 0.292 (G) 0.233 (A) >1 (-) 0 (-) >0.05
rs73292348 chr17:17384769 MED9 C - 13 T vs. G 0.067 (T) - <1 (-) 53 (-) >0.05
rs72826283 chr17:17385701 MED9 C - 9 T vs. G 0.042 (T) - >1 (-) 0 (-) >0.05
rs70959694 chr17:17478195 PEMT C - 13 C vs. G 0.033 (C) 0.083 (C) >1 (-) 16 (-) >0.05
rs11867345 chr17:17478390 PEMT C - 13 T vs. C 0.458 (C) 0.275 (T) >1 (-) 0 (-) >0.05
rs1242489 chr17:17394611 MED9 C - 13 A vs. G 0.308 (A) 0.167 (A) >1 (-) 0 (-) >0.05
rs76883027 chr17:17462762 PEMT C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs8080165 chr17:17447859 PEMT C - 13 T vs. G 0.375 (G) 0.392 (T) >1 (-) 0 (-) >0.05
rs8075019 chr17:17455192 PEMT C - 13 A vs. G 0.092 (A) 0.075 (A) <1 (-) 2 (-) >0.05
rs4646408 chr17:17411211 PEMT C - 13 T vs. C 0.275 (C) 0.158 (T) >1 (-) 0 (-) >0.05
rs17723136 chr17:17379580 MED9 [-720bp] C - 13 T vs. C 0.067 (T) - <1 (-) 56 (-) >0.05
rs73978955 chr17:17415388 PEMT C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs1108579 chr17:17422354 PEMT C - 13 T vs. C 0.467 (C) 0.125 (T) >1 (-) 0 (-) >0.05
rs117828848 chr17:17541782 RAI1 [-43005bp] C - 6 A vs. G 0.008 (G) - <1 (-) 54 (-) >0.05
rs12453926 chr17:17534207 PEMT [+39185bp] C - 13 T vs. C 0.408 (T) 0.392 (C) >1 (-) 0 (-) >0.05
rs75035298 chr17:17473014 PEMT C - 13 T vs. C 0.025 (T) 0.042 (T) >1 (-) 16 (-) >0.05
rs73300558 chr17:17478935 PEMT C - 10 A vs. G - - >1 (-) 18 (-) >0.05
rs73298547 chr17:17460543 PEMT C - 10 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs73292353 chr17:17385533 MED9 C - 13 A vs. G 0.067 (G) - >1 (-) 53 (-) >0.05
rs73296581 chr17:17458965 PEMT C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs143757064 chr17:17481853 PEMT C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs7213809 chr17:17533750 PEMT [+38728bp] C - 13 T vs. C 0.408 (T) 0.392 (C) >1 (-) 0 (-) >0.05
rs56157833 chr17:17478433 PEMT C - 13 A vs. T 0.192 (A) - >1 (-) 0 (-) >0.05
rs73978980 chr17:17479028 PEMT C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs8066002 chr17:17388167 MED9 C - 13 T vs. C 0.067 (T) - <1 (-) 55 (-) >0.05
rs59913959 chr17:17455038 PEMT C - 10 C vs. G 0.008 (C) - >1 (-) 0 (-) >0.05
rs73294315 chr17:17388182 MED9 C - 13 T vs. C 0.067 (T) - <1 (-) 55 (-) >0.05
rs77618594 chr17:17383164 MED9 C - 5 T vs. C - - >1 (-) 27 (-) >0.05
rs144878044 chr17:17390516 MED9 C - 13 A vs. G - - >1 (-) 55 (-) >0.05
rs58167365 chr17:17454765 PEMT C - 10 T vs. G 0.008 (T) - >1 (-) 0 (-) >0.05
rs113873295 chr17:17389906 MED9 C - 12 T vs. C - - <1 (-) 51 (-) >0.05
rs58023844 chr17:17523404 PEMT [+28382bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs74454529 chr17:17432220 PEMT C - 13 A vs. G 0.042 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs12603596 chr17:17503729 PEMT [+8707bp] C - 13 T vs. C 0.042 (C) 0.358 (C) <1 (-) 8 (-) >0.05
rs8076452 chr17:17499654 PEMT [+4632bp] C - 13 T vs. C - - <1 (-) 3 (-) >0.05
rs11650499 chr17:17519037 PEMT [+24015bp] C - 13 A vs. G 0.483 (G) 0.042 (A) <1 (-) 5 (-) >0.05
rs77199448 chr17:17386066 MED9 C - 11 A vs. C - - >1 (-) 50 (-) >0.05
rs74997466 chr17:17462148 PEMT C - 13 T vs. G 0.033 (T) 0.092 (T) >1 (-) 17 (-) >0.05
rs60343188 chr17:17461186 PEMT C - 13 T vs. G 0.033 (T) 0.075 (T) >1 (-) 17 (-) >0.05
rs7218582 chr17:17529113 PEMT [+34091bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs56656484 chr17:17463480 PEMT C - 13 C vs. G 0.033 (C) 0.058 (C) >1 (-) 17 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.